Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1715 ATGTCTTACTTAGAGTCTCAGGTCTACAAAGAGAGAAAGTTTGAAGAAGAATCAGAAGAGGTCACTCTTGATGGGAGTGTTGATTTCCATGGACGTCCTGCAATCAGAGCCAAATCTGGCAGATGGGTGGCTGCAATTATCATCCTCTTGAACCAAGCTCTGGCAACTCTTGCATTTTTTGGGATTGGAGTGAACCTAGTGTTGTTTCTGACAAGGGTGGTAGGACAAAACAATGCTGATGCAGCCAACAATGTGAGCAAGTGGACCGGAACTGTTTACATCTTCTCTCTAGTGGGTGCTTTCCTCAGTGATTCTTATTGGGGAAGATATAAAACTTGTGCTGTCTTTCAGGTCATATTTGTTATAGGTCTAATGTCCTTATCCCTTTCATCATACCTATTCTTGCTTAAGCCTAAAGGTTGTGGTAATGAATCAGTTAATTGTGGGAAACATTCAAAATTGGAGATGGGGATGTTCTACCTCTCAATCTATCTTGTTGCCTTGGGGAATGGAGGTTATCAACCAAATATTGCCACATTTGGGGCAGATCAGTTTGACGAGGAGCACTCAAAGGAGGGTCACAATAAGGTGGCCTTCTTTAGCTACTTCTACCTAGCTTTTAACATTGGCCAACTCTTCTCGAACACCATTCTGGTCTATTTTGAGGACGAAGGAATGTGGGCTCTTGGTTTCTGGCTGTCTGCAGGCTCCGCCTTTGCTGCATTGGTCTTGTTTCTTGTATGCACCCCAAGGTATAGACACTTCAAGCCTAGTGGCAACCCTCTCTCCAGGTTCAGCCAAGTCCTTGTGGCTGCATCAAGGAAATCCAAAGTTCAAATGTCATCAAACGGAGAGGACTTATTCAACATGGATGCAAAGGAGGCTTCCAACAATGCCAATAGAAAGATTCTCCACACTCACGGGTTCAAGTTCTTGGATAGGGCAGCGTTTATATCTTCAAGAGATCTAGGGGACCAGAAAGGGCTCGGTTACAACCCCTGGCGTCTCTGTCCTGTAAGTCAAGTTGAAGAAGTGAAGTGCATACTGAGACTACTTCCAATCTGGCTCTGCACCATAATATACTCGGTGGTTTTCACACAAATGGCTTCACTTTTTGTGGAGCAAGGTGCTGCCATGAAAACCAAGGTTTCCAACTTCAGAATACCACCAGCTAGCATGTCCAGCTTTGACATCCTCAGTGTGGCTGTTTTCATTTTCTTTTACCGTCGAGTTCTTGATCCGTTTGTGGGAAAACTTAAAAAGACAGATTCTAAGGGACTTACAGAACTTCAGAGAATGGGAGTTGGACTTGTTATAGCTGTACTGGCAATGGTTTCGGCTGGATTAGTTGAATGCTATAGGCTCAAGTATGCAAAACAAGGATGCATCCACTGCAATGACTCGAGCACTTTAAGCATCTTCTGGCAAATCCCTCAGTATGCATTTATAGGAGCTTCCGAGGTTTTTATGTACGTAGGCCAGTTGGAGTTCTTCAATGCTCAGACACCAGACGGCTTGAAGAGCTTTGGAAGTGCTCTTTGCATGACATCCATTTCCCTTGGGAACTATGTGAGTAGCTTACTTGTTAGTGTGGTTATGAAGATATCCACCGAAGATCACATGCCGGGGTGGATCCCTGGAAACCTCAACAAAGGTCACTTAGATAGATTTTACTTCCTCTTAGCTGCCTTGACATCGATAGACTTGATTGCTTATATTGCATGTGCAAAATGGTACAAGTGTATACAGCTAGAGGCAAACACTGGAGAGATTGATGAGCCAGAAGTATAA 1791 0.4394 MSYLESQVYKERKFEEESEEVTLDGSVDFHGRPAIRAKSGRWVAAIIILLNQALATLAFFGIGVNLVLFLTRVVGQNNADAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQVIFVIGLMSLSLSSYLFLLKPKGCGNESVNCGKHSKLEMGMFYLSIYLVALGNGGYQPNIATFGADQFDEEHSKEGHNKVAFFSYFYLAFNIGQLFSNTILVYFEDEGMWALGFWLSAGSAFAALVLFLVCTPRYRHFKPSGNPLSRFSQVLVAASRKSKVQMSSNGEDLFNMDAKEASNNANRKILHTHGFKFLDRAAFISSRDLGDQKGLGYNPWRLCPVSQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTKVSNFRIPPASMSSFDILSVAVFIFFYRRVLDPFVGKLKKTDSKGLTELQRMGVGLVIAVLAMVSAGLVECYRLKYAKQGCIHCNDSSTLSIFWQIPQYAFIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLLVSVVMKISTEDHMPGWIPGNLNKGHLDRFYFLLAALTSIDLIAYIACAKWYKCIQLEANTGEIDEPEV* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1715 596 Pfam POT family 110 538 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso1g1715 596 SUPERFAMILY MFS general substrate transporter 32 585 IPR036259 -
Gso1g1715 596 CDD MFS_NPF7 42 578 - -
Gso1g1715 596 PANTHER PEPTIDE TRANSPORTER 17 588 - -
Gso1g1715 596 Gene3D MFS general substrate transporter like domains 13 587 IPR036259 -
Gso1g1715 596 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 17 588 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1715 Gso-Chr1 53910370 53916938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1715 1 587 Organic Solute Cotransporters AT1G32450 75.465 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1715 K14638 - gmx:100776457 1166.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1715 1 53910370 53916938 Gso1g1715 1 53910370 53916938 ECH
Gso1g1715 1 53910370 53916938 Gso11g0361 11 3093075 3099806 GST
Gso1g1715 1 53910370 53916938 Gso5g0614 5 7416965 7423064 PCT
Gso1g1715 1 53910370 53916938 Gso17g1294 17 12831911 12837902 PCT
Gso5g0614 5 7416965 7423064 Gso1g1715 1 53910370 53916938 PCT
Gso17g1294 17 12831911 12837902 Gso1g1715 1 53910370 53916938 PCT