Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1294 ATGGCCTGCTTAGAAGTCAGCAAAGAGGTAAAGTTCAAAGGTGACACGGAAGAACTCACTCTTGATGGAAGTGTTGATTGGCATGGTCGCCCTGCAATTAGAGCCAAATCTGGCAGATGGGTTGCTGGAACCATCGTTCTATTGAACCAAGGTCTGGCAACCTTAGCATTCTTTGGAGTAGGGGTGAACCTAGTGCTGTTCCTGACAAGAGTGATGGGGCAAGATAATGCTGAAGCTGCAAACAATGTGAGCAAGTGGACTGGCACAGTTTACATCTTCTCTCTTGTGGGTGCTTTCCTAAGTGATTCGTATTGGGGAAGATACAAAACTTGTGCCATCTTTCAGGTCATCTTTGTAATAGGTCTAGTATCCTTGTCTCTTTCATCATACCTCTCCTTGATTAGGCCTAAAGGTTGTGGGAATGAAACAATTCCATGTGGGAAACATTCAAGCTTGGAGATGGGGATGTTCTACCTCTCAATCTATCTTATTGCTTTAGGGAATGGAGGGTATCAACCAAATATTGCCACATTTGGAGCTGATCAGTTTGACGAGGAGCACTCAAAGGAGGGTTACTCAAAGGTTGCCTTCTTTAGCTACTTCTATCTGGCTTTGAACCTTGGTTCACTCTTCTCAAACACAATTCTAGGCTATTTTGAAGATGAAGGACTGTGGGCTCTAGGGTTCTGGGTGTCTGCAGGCTCTGCTTTTGCTGCCCTTGTCTTATTTCTTCTTGGGACCCCAAGATATAGACACTTCAAACCTAGTGGCAATCCTCTTTCAAGGTTCAGCCAAGTCCTTGTTGCTGCATCAAGGAAATGGAGAGCTCAAATGGCATCAAATGGAGAGGATCTATATGTCATGGATGAAAATGAATCTCCCACCAATGGCAACAGGAAGATTCTCCACACCGAAGGGTTCAAGTTTCTGGATAGAGCAGCGATTATATCTTCCAGAGATCTAGAAGACCAAAAGAGTGGCGTTTATAACCCCTGGCGTCTCTGCCCTATAACTCAAGTTGAAGAAGTGAAGTGCATACTAAGACTTCTTCCTATTTGGCTTTGCACGATAATATACTCAGTGGTTTTCACACAAATGGCTTCTCTTTTTGTGGAGCAAGGGGCTGCCATGAAAACTACAATTTCCCATTTCAGAATACCACCTGCAAGCATGTCTAGCTTTGACATCCTCAGCGTAGCTGTCTTCATTTTCTTCTACCGTCGAGTGATTGATCCACTTGTCGGAAGACTTAAAAAGAAAAGTTCCAAGGGACTTACTGAGCTTCAGAGAATGGGAATAGGGCTTGTTATAGCTGTAATGGCAATGGTTTCAGCTGGAATAGTTGAATGCTACAGACTTAAGTATGCAGACCCAGTATGCCCCCACTGCAGTGGCACAAGCTCTTTAACCATCTTTTGGCAAATTCCTCAGTACACACTTATTGGAGCTTCAGAGGTTTTCATGTATGTAGGCCAGTTAGAGTTCTTCAATGCTCAGACGCCAGATGGCTTAAAGAGCTTCGGAAGTGCCCTTTGCATGACGTCCATATCTCTTGGGAACTACGTAAGTAGCTTACTTGTTAGTATAGTTATGAAGATCTCCACTGAGGATCACATGCCAGGGTGGATCCCTGGAAACTTAAACAGAGGTCACCTAGATAGGTTTTACTTCCTCTTAGCTATCTTGACATCTATAGATTTGGTCCTTTATATTGCATGTGCAAAGTGGTTCAAGAGTATACAGCTGGAAGGGAAATATGAAGAGAATGATATGCCTGGTAGCTTTAAAGTCTAA 1794 0.4353 MACLEVSKEVKFKGDTEELTLDGSVDWHGRPAIRAKSGRWVAGTIVLLNQGLATLAFFGVGVNLVLFLTRVMGQDNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAIFQVIFVIGLVSLSLSSYLSLIRPKGCGNETIPCGKHSSLEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEEHSKEGYSKVAFFSYFYLALNLGSLFSNTILGYFEDEGLWALGFWVSAGSAFAALVLFLLGTPRYRHFKPSGNPLSRFSQVLVAASRKWRAQMASNGEDLYVMDENESPTNGNRKILHTEGFKFLDRAAIISSRDLEDQKSGVYNPWRLCPITQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTISHFRIPPASMSSFDILSVAVFIFFYRRVIDPLVGRLKKKSSKGLTELQRMGIGLVIAVMAMVSAGIVECYRLKYADPVCPHCSGTSSLTIFWQIPQYTLIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLLVSIVMKISTEDHMPGWIPGNLNRGHLDRFYFLLAILTSIDLVLYIACAKWFKSIQLEGKYEENDMPGSFKV* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1294 597 Gene3D MFS general substrate transporter like domains 12 584 IPR036259 -
Gso17g1294 597 CDD MFS_NPF7 40 576 - -
Gso17g1294 597 SUPERFAMILY MFS general substrate transporter 31 583 IPR036259 -
Gso17g1294 597 Pfam POT family 108 536 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso17g1294 597 PANTHER PEPTIDE TRANSPORTER 15 586 - -
Gso17g1294 597 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 586 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1294 Gso-Chr17 12831911 12837902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1294 1 591 Organic Solute Cotransporters AT1G32450 76.471 0.0 946
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1294 K14638 - gmx:100778608 1183.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0614 5 7416965 7423064 Gso17g1294 17 12831911 12837902 GST
Gso1g1715 1 53910370 53916938 Gso17g1294 17 12831911 12837902 PCT
Gso11g0361 11 3093075 3099806 Gso17g1294 17 12831911 12837902 PCT
Gso17g1294 17 12831911 12837902 Gso1g1715 1 53910370 53916938 PCT
Gso17g1294 17 12831911 12837902 Gso11g0361 11 3093075 3099806 PCT