Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1546 ATGGGGGATATTAGGCATTCACGGGTAGAGCAAGGTCAAACAAAGATTAAAAATGTTCCAATTGCTGTCACCCCTGAAGGGTTTTGGTGTTGCCCTACTCCTGTTGGGTTTCAGAAAAGCCTCAAGCCTCAAAACCCTTTGAATAAACTCAAACCCTCTTCACCACCCCCAAAGACCAGTTCCCAGAAAAAGGCTGTCTCAGTGAGTGAGAGAAAAACAGTGCCTGCCCCATCAAGATTGGTGGTTTCAGATGCTCAACAATGTAATGATGATCCAGAAAGACCTCCACCTAGCACTTCTGTGCCTGCACAGAGAACACCCAAGCCCAAACTTGAATCTTTGCCCAAAAAGGTAGCTATTGAGTTTGGTGAACCTGGAACTTGTGACATGAAGCTGCTTCTCCTTGGAAAGCAGGGATTTTGTGTGAAGTTAAGTGTGCACAGGGATGTTCTAATAGAGAAAAGTAGTTTCTTTGCTGATAAACTTTCTGAACAATCTGGTTTATCATGTCTCCAAGTTGATGACTGTGAGGATGTTGAAATATATGTTGAGACTGTTGGACTTATGTACTGCAAAGAAATGAAACAGCGGCTAATGAAGCAAAGTGTTTCTCGCATTCTTCGAATACTCAAGGTCACAGAATTCCTTGGCTTCAGCTCATGTATCCAATCATGTTTGGAGTACTTGGAGGCAGTCCCTTGGAATGGAGAGGAAGAAGAAGAAAAGGTGATCTCAACCATCCTACGACTCCAAGGAGAAGGAATTGGGGTAAATCCGGTGCTAAAACGAGTTTCTCCTGATTTTTCTAATTCCCCAAAAGATACCCTCTCCCACATTGTTGAACTTGTTCTCAAAAGCAATGAGGAGAGAGGTCGCCGAGAGATGAAATCCATAGTTCTAAAGCTCCTTAGGGAGAATAACAGTCTTCCAAGTTCTTCAGGCTCAGCTGACCTCTGTAATGACATGATTAATAAGTCATGCAGAAATTGCATGGATTCTTTATTGTGTCTGTTCAACCAGGTGGCAGAGCCAAGCTTTAGTGATAACAAAGAACCTGTAGTAAAACATATAGCTCTTGAAGCTGATAACTTGTCATGGTTGCTTGAGATTTTAGTTGACAAACAAGCTGCTGAAGATTTTGCGCTGATGTGGGCAAACCAGCAGGAATTGGCAGCCCTCCATGGAAAGCTTCCGATTGCATTTCGTTATCATGTCAGTTGCATTTCAGGAAGACTATATGTTGGCATTGGAAGAGGGGAGGTTTTGCCATCAAAGAACACGCGCCAGTTGTTGTTGCAGACATGGCTACAGCCTCTAATCAATGACTATAACTGGTTGCAGCACGGGTGCAGGTCATTTGATAGGAAACTTGTGGAGGAAGGAATTGGAAGGACAATTCTCACCTTGCCTTTGGAGGATCAGCAGAGTATTTTGCTTTCATGGGTTGGAAGTTTCTTGAAAACTGGTGATGGCTGTCCCAATCTTCAGAGAGCTTTTGAGGTGTGGTGGCGGAGGACTTTCATTAGGCCATATGTGGAAGGCCAAAGTAATGCCATGCCAGATAGTTGA 1569 0.4366 MGDIRHSRVEQGQTKIKNVPIAVTPEGFWCCPTPVGFQKSLKPQNPLNKLKPSSPPPKTSSQKKAVSVSERKTVPAPSRLVVSDAQQCNDDPERPPPSTSVPAQRTPKPKLESLPKKVAIEFGEPGTCDMKLLLLGKQGFCVKLSVHRDVLIEKSSFFADKLSEQSGLSCLQVDDCEDVEIYVETVGLMYCKEMKQRLMKQSVSRILRILKVTEFLGFSSCIQSCLEYLEAVPWNGEEEEEKVISTILRLQGEGIGVNPVLKRVSPDFSNSPKDTLSHIVELVLKSNEERGRREMKSIVLKLLRENNSLPSSSGSADLCNDMINKSCRNCMDSLLCLFNQVAEPSFSDNKEPVVKHIALEADNLSWLLEILVDKQAAEDFALMWANQQELAALHGKLPIAFRYHVSCISGRLYVGIGRGEVLPSKNTRQLLLQTWLQPLINDYNWLQHGCRSFDRKLVEEGIGRTILTLPLEDQQSILLSWVGSFLKTGDGCPNLQRAFEVWWRRTFIRPYVEGQSNAMPDS* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1546 522 PANTHER BTB/POZ DOMAIN PROTEIN 1 518 - -
Gso1g1546 522 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 1 518 IPR038920 -
Gso1g1546 522 MobiDBLite consensus disorder prediction 40 110 - -
Gso1g1546 522 MobiDBLite consensus disorder prediction 40 68 - -
Gso1g1546 522 Gene3D Potassium Channel Kv1.1; Chain A 122 249 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1546 Gso-Chr1 52148868 52153201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1546 - - gmx:100818853 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1546 1 52148868 52153201 Gso11g0529 11 4729164 4732926 GST
Gso1g1546 1 52148868 52153201 Gso2g0504 2 5371619 5377046 PCT
Gso1g1546 1 52148868 52153201 Gso16g1146 16 30495690 30501137 PCT
Gso2g0504 2 5371619 5377046 Gso1g1546 1 52148868 52153201 PCT
Gso16g1146 16 30495690 30501137 Gso1g1546 1 52148868 52153201 PCT