Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1146 ATGGCAGAAATTAGGCTCACCAGGGTTGAGCAAGGCCAAACCAAGATTAAGAATGTTCCTATAGCTGTCACACCAGAAGGGTTTTGGTGCTGCCCTTCCCCTGTGGTGTTTCAGAAAAGCCTCAAAACTCAAAATCCTCTCAATAAACACAAACCCTCTTCACCACCCCCACCAAAAACCGGTGTTCAGAAAAAGCCAGTGGCCGTGCCTGTGTCTGTGTCAGTGAGTGAGAGAAGAACTGCATCATCTGCCCCTTCAAGATTGGTGCTTTCTGATGAAAAACCATGTTCAACTGCTCCAGAAAGGCCTCCACCTACCACCACATCTGTGGCTGCTGCAGAGAGGGCACCCAGGCAAAAAATTGAATCTTTGCCAAAGAAGGTTGCTATTGAGTTTGGTGAGCCTGGAACTTGTGATATGAAAGTGGTTTTGTTAGGAAAGCAGGGGTTTTGTGTCAAGTTGAGTGTTCACAGGGATGTTTTGACCCAGAAGAGTGGTTTCTTTTCTGAAAAACTCTCCGAACAATCGGGTATGTCGTGCCTCCAAATCGCTGACTGCGAGGATGTGGAGATATATGTTGAAACTGTTGGTCTTATGTACTGTAAGGAGATGAAGCAACGGCTTATGAAGCAAAGTGTTTCTCGCATTCTTCGAATACTTAAGGTAGCAGAATTCCTTGGCTTCAGCTCGTGTATCCAATCATGTTTGGAGTACTTGGAGGCAGTCCCTTGGGTTGGAGAAGAAGAGGAAGAAAAGGTGGTCTCAACTGTACTACAACTCCAAGCAGAAGGAATTGGAGTCAACCCTGTGCTGAAACGAATTTCATCCGACATTTCTAATGTCCCAAAAGACACTCTTTCCCACATCATCGACCTTGTTCTCAAGAGCAATGAGGAAAGTGGCCGTCGAGAGATGAAATCCATTGTTCTAAAGCTCTTCAGGGAGAACAACAGTCTTCCAAGCTATGCGCGATCAACCGACATATGCAATGACATGATTTACAGATCATGCAGAAGCTGCTTGGATTCATTGCTGTCTCTATTCAAGCAGGCTGCAGAACCAGACAAACTGAGTGAGGACCACAATCCTACAGCAAAGTGCATTGCTCTCGAAGCTGATAACTTATCATGGTTGCTTGAGATTTTAATTGACAAACAAGCTGCTGATGAGTTTGCACTGATGTGGGCAAACCAACAGGAACTGGCTGTGCTACATGCAAAGCTGCCGACCGTGTCACGCTACTATGTTAGCTGCCTTTCGGGGAGACTGTATGTTGGCATTGGAAGAGGGGAGTTGTTGCCATCAAAGGATGTGCGCCGGTTGTTGTTACAGACATGGCTGCAGCCTCTGATGAATGACTACAACTGGCTGCAGCATGGATGCAGGTCATTTGATAGGAAACTTGTGGAGGAAGGAATTGGGAGGACTATTCTCACCTTGCCTCTTGAGGATCAACAAAGCATTTTGCTTTCATGGTTGGGGAGTTTCTTGAAAACTGGTGATAGCTGTCCCAATCTTCAAAGGGCATTTGAGGTGTGGTGGAGGAGAACCTTCATTAGGCCATATGTGGAGAACCAAGGTAATGTTGCTGTGTCAGATAGTAGTTCAATGTTGCCAAAGCAGCGTGAGTGA 1632 0.4608 MAEIRLTRVEQGQTKIKNVPIAVTPEGFWCCPSPVVFQKSLKTQNPLNKHKPSSPPPPKTGVQKKPVAVPVSVSVSERRTASSAPSRLVLSDEKPCSTAPERPPPTTTSVAAAERAPRQKIESLPKKVAIEFGEPGTCDMKVVLLGKQGFCVKLSVHRDVLTQKSGFFSEKLSEQSGMSCLQIADCEDVEIYVETVGLMYCKEMKQRLMKQSVSRILRILKVAEFLGFSSCIQSCLEYLEAVPWVGEEEEEKVVSTVLQLQAEGIGVNPVLKRISSDISNVPKDTLSHIIDLVLKSNEESGRREMKSIVLKLFRENNSLPSYARSTDICNDMIYRSCRSCLDSLLSLFKQAAEPDKLSEDHNPTAKCIALEADNLSWLLEILIDKQAADEFALMWANQQELAVLHAKLPTVSRYYVSCLSGRLYVGIGRGELLPSKDVRRLLLQTWLQPLMNDYNWLQHGCRSFDRKLVEEGIGRTILTLPLEDQQSILLSWLGSFLKTGDSCPNLQRAFEVWWRRTFIRPYVENQGNVAVSDSSSMLPKQRE* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1146 543 PANTHER BTB/POZ DOMAIN PROTEIN 1 530 - -
Gso16g1146 543 MobiDBLite consensus disorder prediction 45 111 - -
Gso16g1146 543 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 1 530 IPR038920 -
Gso16g1146 543 Gene3D Potassium Channel Kv1.1; Chain A 132 263 IPR011333 -
Gso16g1146 543 SUPERFAMILY POZ domain 137 239 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1146 Gso-Chr16 30495690 30501137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1146 - - gmx:100789609 1008.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0504 2 5371619 5377046 Gso16g1146 16 30495690 30501137 GST
Gso1g1546 1 52148868 52153201 Gso16g1146 16 30495690 30501137 PCT
Gso11g0529 11 4729164 4732926 Gso16g1146 16 30495690 30501137 PCT
Gso16g1146 16 30495690 30501137 Gso1g1546 1 52148868 52153201 PCT
Gso16g1146 16 30495690 30501137 Gso11g0529 11 4729164 4732926 PCT