Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1527 ATGGTAACATCAAAGCCTCATGCAGCACTTATAGCAAGCCCCGGCATGGGGCACCTAATTCCCATGGTGGAGCTAGGCAAACGCCTCCTCACTCACCACTCCTTCCACGTCACCATCTTCGTCGTCACCACCGACTCCGCAATCACAACCTCTCACATACTCCAACAAACATCAAACCTCAACATCGTCCTTGTCCCTCCCATCGATGTCTCCCACAAACTACCACCCAACCCGCCCTTAGCAGCACGAATTCTGTTAACCATGCTCGACTCCATACCCTTTGTGCACTCTTCCATTCTGTCCACCAAGCTTCCTCCTCCTTCGGCACTCATCGTTGACATGTTCGGATTTGCAGCTTTTCCCATGGCACGTGACCTCGGCATGCTTATCTACGTTTACTTCGCCACCAGCGCCTGGTTCTCTGCGGTTACCGTATACGTTCCCGCCATGGACAAGAAAATGATTGAAAGCCACGCGGAAAACCACGAGCCGCTCGTGATTCCCGGTTGCGAAGCGGTTTGGTTCGATGACACGCTCGAACCGTTTTTATCGCCTATAGGGGAGATGTACCAGGGTTACCTTACAGCAGCAAAGGAGATAGTGACCGCTGATGGAATTTTGATGAACACGTGGCAAGATCTGGAGCCCGCTGCGACGAAGGCGGTGAGAGAGGACGGGATATTGGGCCGGTTTACGAAGGCGGAGGTGTATTCGGTTGGACCGCTGGTGAGAACCGTGGAGAAAAAACCGGAGGCTGCGGTTTTAAGTTGGCTGGACGGTCAACCGGCTGAGTCGGTGGTCTATGTGTCCTTCGGGAGCGGTGGGACAATGTCAGAGGTTCAAATGAGGGAAGTGGCGTTGGGCTTGGAGCTGAGTCAACAGAGGTTTGTTTGGGTGGTGCGGCCACCGTGCGAGGGCGACGCGAGTGGCTCGTTTTTTGAAGTATCGAATGGTGGTGACGTGGCGCTGAATTACTTGCCGGAGGGGTTCGTGAAAAGAACGGAAGCGGTGGGGGTTGTGGTCCCCATGTGGGCCCCGCAGGCGGAGATTCTGGGACATCCAGCGACGGGTGGTTTCGTGACGCACTGTGGTTGGAATTCTGTTTTGGAGAGCGTTCTGAACGGGGTTCCCATGGTGGCGTGGCCGCTTTACGCGGAGCAGAAAATGAACGCGTTTATGCTGTCGGAGGAGCTTGGGGTGGCGGTGCGGGTGGCGGAGGAGGGAGGAGTTGTGAGAAGAGAACAGGTAGCGGAGCTGGTGAGAAGAGTGATGGTGGATGAAGAAGGTTTTGGTATGAGGAAGAAGGTTAAGGAGCTGAAAGTGAGTGGAGAGAAAGCGTTGTCTAAGGTTGGATCCTCTCATCATTGGCTTTGTCAAATGAGCAAGGACTGTGAAGCTCATGTGCAGGGTTCTGAGGCTAAAGTTTCTTCTGCTTACACTACTACCACTGCTGTGCTCAGCGACGTCGTTCGCTCTTGA 1479 0.5429 MVTSKPHAALIASPGMGHLIPMVELGKRLLTHHSFHVTIFVVTTDSAITTSHILQQTSNLNIVLVPPIDVSHKLPPNPPLAARILLTMLDSIPFVHSSILSTKLPPPSALIVDMFGFAAFPMARDLGMLIYVYFATSAWFSAVTVYVPAMDKKMIESHAENHEPLVIPGCEAVWFDDTLEPFLSPIGEMYQGYLTAAKEIVTADGILMNTWQDLEPAATKAVREDGILGRFTKAEVYSVGPLVRTVEKKPEAAVLSWLDGQPAESVVYVSFGSGGTMSEVQMREVALGLELSQQRFVWVVRPPCEGDASGSFFEVSNGGDVALNYLPEGFVKRTEAVGVVVPMWAPQAEILGHPATGGFVTHCGWNSVLESVLNGVPMVAWPLYAEQKMNAFMLSEELGVAVRVAEEGGVVRREQVAELVRRVMVDEEGFGMRKKVKELKVSGEKALSKVGSSHHWLCQMSKDCEAHVQGSEAKVSSAYTTTTAVLSDVVRS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1527 492 Gene3D Glycogen Phosphorylase B; 7 453 - -
Gso1g1527 492 ProSitePatterns UDP-glycosyltransferases signature. 344 387 IPR035595 -
Gso1g1527 492 PANTHER UDP-GLYCOSYLTRANSFERASE 72C1 3 466 - -
Gso1g1527 492 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 261 406 IPR002213 GO:0008194
Gso1g1527 492 Gene3D Glycogen Phosphorylase B; 252 448 - -
Gso1g1527 492 PANTHER GLYCOSYLTRANSFERASE 3 466 - -
Gso1g1527 492 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 457 - -
Gso1g1527 492 CDD GT1_Gtf-like 6 440 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1527 Gso-Chr1 51955970 51957957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1527 1 465 Glycosyltransferase AT3G50740 47.789 4.29e-155 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1527 K12356 - gmx:100781979 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1527 1 51955970 51957957 Gso11g0548 11 4904554 4906265 GST