Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0548 ATGGTAACATCAAAGGCTCATGCAGCACTTGTAGCCAGCCCCGGCATGGGGCACCTCATTCCCATGCTGGAGCTAGGCAAACGCCTCCTCACTCACCATTCCTTCCACGTCACCATCTTCATCGTCACCACCGATACCGCAACCACAACCTCTCACATACTCCAACAAACATCCAATCTCAACATCGTCCTTGTCCCTCCCATCGATGTCTCCCACAAGCTACCACCCAACCCGCCCTTAGCAGCACGAATTATGTTAACCATGATCGACTCCATACCCTTTTTGCGATCTTCCATTCTATCCACCAACCTCCCTCCTCCTTCGGCACTCATTGTCGACATGTTCGGTCTTGCAGCTTTTCCCATTGCACGTGACCTCGGCATGCTTACCTACGTTTACTTCGCCACCAGCGCCTGGTTCTCTGCGGTTTCCGTATACGTTCCCGCTATGGACAAGAAAATGATTGAACGCCATGCGGAACACCACGAACCGCTTGTGATTCCCGGTTGCGAAGCGGTTCGGTTCGAGGACACGCTGGAACCGTTTTTATCGCCTATAGGGGAGATGTACGAAGGTTACCTCGCAGCGGCAAAGGAAATAGTAACCGCAGACGGAATTTTGATGAACACGTGGCAAGATCTGGAGCCCGCTGCGACGAAGGCGGTGAGAGAGGACGGGATATTGGGCCGGTTTACGAAGGGAGCGGTGTATCCGGTTGGACCGCTAGTTAGAACCGTGGAGAAAAAAGCGGAGGATGCGGTTTTAAGTTGGATGGACGTGCAACCGGCTGAGACGGTCGTCTACGTGTCTTTCGGGAGCGGTGGAACCATGTCAGAGGTTCAAATGAGGGAAGTGGCGTTGGGGTTGGAGCTGAGTCAGCAGAGGTTTGTTTGGGTGGTGCGGCCACCGTGCGAGGGTGACACGAGTGGCTCGTTTTTCGAAGTATCGAAAAATGGCAGTGGTGATGTGGTGCTTGATTACTTGCCGAAGGGGTTTGTGAAAAGAACGGAAGGGGTGGGGGTTGTGGTCCCCATGTGGGCCCCGCAGGCGGAGATCCTGGGACATCCTGCGACGGGTTGTTTCGTGACGCACTGTGGTTGGAATTCCGTCTTGGAGAGCGTGCTCAACGGGGTTCCCATGGTGGCGTGGCCGCTATACGCGGAGCAGAAAATGAACGCGTTTATGCTGTCGGAGGAGCTTGGGGTGGCGGTGCGCGTGGCGGGGGAGGGAGGAGGAGGAGTTGTGGGAAGAGAAGAGATAGCGGAGCTGGTGAGAAGAGTGATGGTGGATAAAGAAGGAGTTGGTATGAGGAAGAAGGTTAAGGAGCTGAAAGTGAGTGGAGAGAAAGCCTTGTCTAGGTTTGGATCCTCTCATCATTGGCTTTGTCAAATGAACAAGGACTGTCAAGTTCATGCGCAGGCTTCTGAGGCTGACTACTTAGGGACTGCTACTACCACTACTGATGTGCTCAGCGACGTCGTTTGCTCTTGA 1491 0.5412 MVTSKAHAALVASPGMGHLIPMLELGKRLLTHHSFHVTIFIVTTDTATTTSHILQQTSNLNIVLVPPIDVSHKLPPNPPLAARIMLTMIDSIPFLRSSILSTNLPPPSALIVDMFGLAAFPIARDLGMLTYVYFATSAWFSAVSVYVPAMDKKMIERHAEHHEPLVIPGCEAVRFEDTLEPFLSPIGEMYEGYLAAAKEIVTADGILMNTWQDLEPAATKAVREDGILGRFTKGAVYPVGPLVRTVEKKAEDAVLSWMDVQPAETVVYVSFGSGGTMSEVQMREVALGLELSQQRFVWVVRPPCEGDTSGSFFEVSKNGSGDVVLDYLPKGFVKRTEGVGVVVPMWAPQAEILGHPATGCFVTHCGWNSVLESVLNGVPMVAWPLYAEQKMNAFMLSEELGVAVRVAGEGGGGVVGREEIAELVRRVMVDKEGVGMRKKVKELKVSGEKALSRFGSSHHWLCQMNKDCQVHAQASEADYLGTATTTTDVLSDVVCS* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0548 496 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 257 399 IPR002213 GO:0008194
Gso11g0548 496 PANTHER GLYCOSYLTRANSFERASE 3 470 - -
Gso11g0548 496 Gene3D Glycogen Phosphorylase B; 252 452 - -
Gso11g0548 496 PANTHER UDP-GLYCOSYLTRANSFERASE 72C1 3 470 - -
Gso11g0548 496 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 461 - -
Gso11g0548 496 ProSitePatterns UDP-glycosyltransferases signature. 346 389 IPR035595 -
Gso11g0548 496 Gene3D Glycogen Phosphorylase B; 7 457 - -
Gso11g0548 496 CDD GT1_Gtf-like 6 444 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0548 Gso-Chr11 4904554 4906265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0548 1 459 Glycosyltransferase AT3G50740 48.276 6.82e-156 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0548 K12356 - gmx:100783673 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0548 11 4904554 4906265 Gso11g0548 11 4904554 4906265 ECH
Gso1g1527 1 51955970 51957957 Gso11g0548 11 4904554 4906265 GST