Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1304 ATGATGGAAAGTCCTCCTAAATGCAAACTCACATTCACATTAATCTTCTTCATCGTTGTCTCCCACTCTCTTGGCTTAGTTTCCTTCACCTTGTGCATAGCCTCCGAGACTAAGAGGAACAAGAAGGGGGATCTCAGATGGAATGGGAAACTATGTCATTTACCATCAAGTCCAGCATTTGGATTGGGTATTGCATCTTTGGTTTGTTTGGTTTTGTCCCAAATTGTTGGGAATTCTATATTATTCAAGACTTATTGTTCAGGAGGGAAAAGAAACGCAAAGTGTGAGATCCCTTTCGTTGCCAGGATTCTGCTTTTGATCTCTTGGCTAAGCTTTGGAATTGCAGTTATTTTATTAATCGTTGCCACAAGCATGAGCAGAAGGCAGGCCTATGGGGAAGGGTGGTTGAATGGTGAGTGCTACCTTGTCAAAGGAGGGATTTACGTTGGTTCAGCCATATTGATCCTAGTTTCAGTAGAATCGTTAATGGGTTCAGCTTTGTTAACAATGAAGACCAATGAAGAAGCAGATCAGGGTAACAAAATACACGCACAAACGGAACGGGGTGACACTTGA 576 0.4219 MMESPPKCKLTFTLIFFIVVSHSLGLVSFTLCIASETKRNKKGDLRWNGKLCHLPSSPAFGLGIASLVCLVLSQIVGNSILFKTYCSGGKRNAKCEIPFVARILLLISWLSFGIAVILLIVATSMSRRQAYGEGWLNGECYLVKGGIYVGSAILILVSVESLMGSALLTMKTNEEADQGNKIHAQTERGDT* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1304 191 Pfam Protein of unknown function (DUF1218) 67 159 IPR009606 -
Gso1g1304 191 PANTHER PROTEIN MODIFYING WALL LIGNIN-1 9 187 - -
Gso1g1304 191 PANTHER OS07G0462200 PROTEIN-RELATED 9 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1304 Gso-Chr1 49538905 49540911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1304 - - gmx:100779666 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1304 1 49538905 49540911 Gso1g1304 1 49538905 49540911 ECH
Gso1g1304 1 49538905 49540911 Gso9g1802 9 42504921 42506908 GST
Gso1g1304 1 49538905 49540911 Gso16g0611 16 7708189 7710259 PCT
Gso16g0611 16 7708189 7710259 Gso1g1304 1 49538905 49540911 PCT