Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0611 ATGGAAAAACCTCCTAGATGCAAATTCACAGTGTTCTTCTTCATCATAATTTCCCTCTCCCTTGGCTTGATTTCCTTTGTCTTGTGTATCGCCGCCGAGATAAAGAGGAATAAGGAGGAGGATCTCAGGTGGAATGGGAAACTATGTTATTTGCCATCAAGCAAGGCATTTGGATTGGGAATTGCAGCTTTGGTTAGTTTCTTTCTTGCCCAGATCATTGGGAATTCTATATTATTAAAGTATTCTTGTTGGAGAAGAAAAAATAAACCCCACTTCAAGGTGCCTGCTATCGCAAAGATTCTGGTTTTGATATCTTGGGTTAGCTTTGGATTTGCAGCTATTTTATTGATTGCAGCCACAAGCATGAACAGAAAGCAGCCATATAGGGTAGGGTGGTTGAAAGGTGAGTGCTACCTAGTCAAAGGGGGAACCTATGTTGGATCAGCCATATTGGTCCTAGTCACGGTGTGTTCTGTAAATGGTTCGGCTTTCTCAACATTAAAATCAAGCCAAGCAAATCAGCATCAGCATACAAAAAGACACAAACAAATGGGGTGA 558 0.4122 MEKPPRCKFTVFFFIIISLSLGLISFVLCIAAEIKRNKEEDLRWNGKLCYLPSSKAFGLGIAALVSFFLAQIIGNSILLKYSCWRRKNKPHFKVPAIAKILVLISWVSFGFAAILLIAATSMNRKQPYRVGWLKGECYLVKGGTYVGSAILVLVTVCSVNGSAFSTLKSSQANQHQHTKRHKQMG* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0611 185 Pfam Protein of unknown function (DUF1218) 63 156 IPR009606 -
Gso16g0611 185 PANTHER PROTEIN MODIFYING WALL LIGNIN-1 1 175 - -
Gso16g0611 185 PANTHER OS07G0462200 PROTEIN-RELATED 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0611 Gso-Chr16 7708189 7710259 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0611 - - gmx:100500694 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1304 1 49538905 49540911 Gso16g0611 16 7708189 7710259 PCT
Gso9g1802 9 42504921 42506908 Gso16g0611 16 7708189 7710259 PCT
Gso16g0611 16 7708189 7710259 Gso1g1304 1 49538905 49540911 PCT
Gso16g0611 16 7708189 7710259 Gso9g1802 9 42504921 42506908 PCT