Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1303 ATGGAGGACAGAACTATAGGAAGAAATGGTAGTAGCTCTAGAAAGGGTAGCTTTAGGTTGGGGTTGGGAATGGATGGGAAAAAAGATCACACTGTGGTTGAGCTTGGTAGCATTGACACACAGAGACTTCTTCTAAGCAATGGAGAGAGAGAGAAAAAATTACAACCTCTCACCAACACTCTCTCTCCAAGGCAAATGAAATCTCTCTATGCTCTCTGTGACACTATCTTACCTTCTGTCGACCACTTTGTTGACACTTCCGATGAATCTGTCACTAAATTCTATCAGATTTCAGCTTCCATGACCGGAACACCTGAACGTTTTGGGTGCATGATAAGTGAGAAATTGAAGCACCCCTTGACAGGGTTACTGAAGTTTGTGTTATGGCTGTTGTCTACGTGGTTTGGGACATTAATTTTCTGTGGCATGGGATGCTTCTCTACCCAATTCCCCTTCATCCACACCTATCCTGATTTGCCACTTCAGAAACGCCAACAGATTATGCGTTCATGGTCTCTCAGTTACCTTCGTCACTTTAGAATGCTCTTCAGGACCATCAAACTTCTCACTCTCCTAATCTTCTTTACTCAGATAGATGAATCAGAAGACAACGTTGCATGGAAAGCAATTGGATACTGCGGACCTGATCCAGAATTCAAAGCTCGGTTGAAGAGCCACTTTTTAGATGGAACATCTAAAGGAGGACAAGAGGATAAGGAAGATGAAGATGCTGAAGAGGTGATAGGACCACTTTACAAAGGTCTAGTCCATCTCAATTACCCACGAGACATCACTGCAGATGCTCTAAAACGACTCGGATTCCCTGTATCGGTCATCCGTCAGAAGCATAAAGCTGCTGCAAACTTATCATCTCCTTCTTTGGTGATACAATGTGATGCAGTGGTGGTTGGTTCTGGCTCAGGAGGTGGAGTGATAGCTGGTGTTCTTGCAAAAGCTGGTTACAAAGTGTTGGTGTTGGAGAAAGGAGGTTATTCTGCTAGGAACAATCTTTCTCTTCTTGAAGGACCAACCATGGATCAAATGTACCTCAATGGTGGTCTGGTTGCAAGTGATGATATGGGTGTGTTCATTCTATCAGGATCCACTGTTGGTGGAGGGTCAGCAATCAACTGGTCTGCGTGCATTAAAACCCCTCAGCATGTGTGCAAGGAGTGGAGTGATAAACATGGTCTAGAGCTGTTTGAGAGTGAACTGTATAGAGAAGCCTTGAATGCTGTTTGTGAGAAGATGGAAGTTCAATCTGAGATTGAAGATGAAGGATTCAACAATGCAATACTAAGAAAAGGGTGTCAAGAAATGGGGTATCCTGTTAGTAACATTCCTAGGAATTCTGCGGCAGATCACTACTGTGGCTGGTGTTGCATGGGTTGTAAGGATGGGAGGAAGAAGGGTACCTCAGAAACATGGTTAGTGGACTTGGTGAAATCTGGCAATGGAGCAATTCTTCCAGGTTGTGAGGCAATAAAAGTCTTGCACAAGAAAAAGGAAGGGAGGGATAGAAAGATTGCGCGTGGAGTGGCTTTTGAATTTGAATATAAAGGGACTAAAGACATTTGTGTGGTGGAGTCCAAGGTCACAATTGTAGCATGTGGAGCACTGAGTACTCCAGCATTGCTTAAAAAAAGTGGCTTGAGGAATCAGAACATAGGGAGGAACTTGCATCTTCATCCAGTGGCGATGGCTTGGGGATACTTCCCAGATGCACCTGAATCTGAGGTGTGGCCAGAGGCATATAAGAAGAGCTATGAAGGAGGGATAATGACAGCAATGTCAACTGTTGTTGCAGAGTTTGAACAATCTGGATATGGTGCAGTGATCCAAACACCTTCATTGCATCCTGGTATGTTCTCAATTGTCACACCATGGACTTCTGGAATCGATATAAGAGACCGAATGCGAAAGTTTTCAAGAACAGCTCATATATTTGCACTGGCAAGGGATCAAGGATCAGGGACTGTAAAAGCCCCAGATCGTATCAGTTATAAGCCGGCAGGTGTAGATGAAGAGAATTTAAAGAAAGGAATTGAGAAGGTGCTGAGAATTCTGGCAGCAGCTGGTGCTGAAGAAATTGGGACACATCATAATAAGGGAAGGACCTTAAATGTAAAGCAGGTAAGATATCATGAGTTTGAGAAATTTGTTAAAGAGGAAAGTTCAAGGTCATTGACAGACCTTACAACACCATTGTGCTCGGCACATCAAATGGGGAGTTGCCGGATGGGTTCTAATCCAAAGCAATCAGCGGTGAATCAGACAGGGGAGACATGGGAAGTGGAGGGCCTTTATGTGGCAGATACAAGTGTCTTCCCAACAGCATTGGGTGTGAATCCAATGGTTACTGTTCAAGCTATTGCTTATTGCACAGCACAATCTGTTGTTGAAGTACTTAGAAGGAAAAGAACTAAATGA 2430 0.4374 MEDRTIGRNGSSSRKGSFRLGLGMDGKKDHTVVELGSIDTQRLLLSNGEREKKLQPLTNTLSPRQMKSLYALCDTILPSVDHFVDTSDESVTKFYQISASMTGTPERFGCMISEKLKHPLTGLLKFVLWLLSTWFGTLIFCGMGCFSTQFPFIHTYPDLPLQKRQQIMRSWSLSYLRHFRMLFRTIKLLTLLIFFTQIDESEDNVAWKAIGYCGPDPEFKARLKSHFLDGTSKGGQEDKEDEDAEEVIGPLYKGLVHLNYPRDITADALKRLGFPVSVIRQKHKAAANLSSPSLVIQCDAVVVGSGSGGGVIAGVLAKAGYKVLVLEKGGYSARNNLSLLEGPTMDQMYLNGGLVASDDMGVFILSGSTVGGGSAINWSACIKTPQHVCKEWSDKHGLELFESELYREALNAVCEKMEVQSEIEDEGFNNAILRKGCQEMGYPVSNIPRNSAADHYCGWCCMGCKDGRKKGTSETWLVDLVKSGNGAILPGCEAIKVLHKKKEGRDRKIARGVAFEFEYKGTKDICVVESKVTIVACGALSTPALLKKSGLRNQNIGRNLHLHPVAMAWGYFPDAPESEVWPEAYKKSYEGGIMTAMSTVVAEFEQSGYGAVIQTPSLHPGMFSIVTPWTSGIDIRDRMRKFSRTAHIFALARDQGSGTVKAPDRISYKPAGVDEENLKKGIEKVLRILAAAGAEEIGTHHNKGRTLNVKQVRYHEFEKFVKEESSRSLTDLTTPLCSAHQMGSCRMGSNPKQSAVNQTGETWEVEGLYVADTSVFPTALGVNPMVTVQAIAYCTAQSVVEVLRRKRTK* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1303 809 PIRSF Lg_Ch_AO 48 809 IPR012400 GO:0046577
Gso1g1303 809 Gene3D - 282 604 IPR036188 -
Gso1g1303 809 MobiDBLite consensus disorder prediction 1 20 - -
Gso1g1303 809 Pfam GMC oxidoreductase 299 565 IPR000172 GO:0016614|GO:0050660
Gso1g1303 809 Pfam GMC oxidoreductase 665 794 IPR007867 GO:0016614
Gso1g1303 809 SUPERFAMILY FAD/NAD(P)-binding domain 296 800 IPR036188 -
Gso1g1303 809 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 14 809 - -
Gso1g1303 809 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 14 809 - -
Gso1g1303 809 Gene3D - 726 806 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1303 Gso-Chr1 49528757 49536510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1303 28 803 Acyl Lipid Metabolism Gene Families AT4G19380 56.722 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1303 K17756 - gmx:100775376 1610.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1303 1 49528757 49536510 Gso1g1303 1 49528757 49536510 ECH
Gso1g1303 1 49528757 49536510 Gso9g1801 9 42494412 42502676 GST
Gso1g1303 1 49528757 49536510 Gso16g0610 16 7689854 7699960 PCT
Gso16g0610 16 7689854 7699960 Gso1g1303 1 49528757 49536510 PCT