Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0610 ATGAACAGAAAAAACATGGAGAGCAATGGGGAGAGCCATAGCAGTAGAAGTGGTAGCTTCAGGGAGGGGTTCGGGTTGGCTCCGAACGAGGCAAAAGTTCACACTTTGGTTGAGCTTGGTAGTGTTGATTATACACACACTACTACTACTAGTCTTCTTCAAGATGGTGATGATGATGATGTTGGTGAGGAGAGAGAGAAAGAGCAAAGAAAACCTCTTACAAACTCTCTATCTCCTAGGCAGATGAAGTCCCTTGTTGCTCTTTGTGACACCCTCTTACCTTCCATCAACAACAACAACGTTGTTTGGGGCTCTGATGATGAATCTGTTGCCAACTTCTACAAGACTTCGGCTTCCCTGGCTGGAACACCTGAGCATCTTGGGATATTGATAAGTGAGAAGCTGAAGCACCCAAGTACATGGCTGTTGTTGCTGACACTATGGCTACTATCCACATGGTTTGGCACATTCATACTGTGTGGTACGTTGAGCCTCTCAACAAAGTTTCCTTTCTTCCATAGCTACCCAGAATTGTCTCTTCTCAAACGGCAAAAAGTTATGCAGTCTTGGTCTCTCAGTTACCTTCGACCCCTTAGGATGTTCTTCAGAACCATCAAGCTTCTCACTCTCCTTGTCTTCTTCACTCAGCTAGATGAAGCAGAAGACAACCCATCATGGAAGGCAATTGGGTATTGTGGACCTGATCCAGAGTTCAAATCACAGTTGAAGAACCACTTCTTTACAAAGCAAAGAGGACAAGAAGAAAAAGAAGATGATGGCACTGAAGATGTTAGAGGACCTCTTTACAAAGGTCTTATCCGCATAAATAACCCACGAGACATCATTACAGATTCTCTAAGACGAGTTGGATTCTCTGTCTCTGCTACTCCCAAAAAGACCAAGGCTTCTACCCTATCATCTCCTTCTCTAGTTATAAAATGTGATGCAGTGGTTGTTGGTTCTGGCTCTGGAGGAGGGGTAGTAGCTGGAGTTCTTGCAAATGCTGGTTACAAAGTTCTGGTCTTGGAGAAAGGAAGCTATTCTGCTAGGAACAATCTTTCCCTTCTTGAAGGACCAAGCATGGATCAAATGTACCTCTCCAATGGTTTGGTTGCTACAAACGACATGTCTGTGCTAATACTAGCAGGCTCCACAGTTGGTGGAGGGTCTGCAATCAACTGGTCGGCCAGCATTAGAACTCCTCAACATGTGTGCAAGGAGTGGTGCGATCGCCACGAGCTCGAACTATTCGAGAGTATGTTGTACAAAGAAGCCTTGGATGTTGTGTGTGAGAAAATGGGAGTGCAATCTGAGATTGATGATGAAGGGTTCAACAATGCTGTTTTAAGAAGAGGGTGTGTAGAAATGGGGTATCCTGTGTGCAACATTCCCAGGAATGCTACATCTGATCACTACTGTGGCTGGTGTTGCTTGGGGTGCAAGGATGGAAGGAAGAAAGGTACATTGGAAACATGGCTTGTGGACTTGGTGAAATCAGGGAATGGTGCAATCATTCCAAGTTGTGAGGCTATTCAAGTCTTGCATAAGAAAAAGAAAGGAAGGCACAGAAAAATAGCAAGGGGTGTGGCTTTTGCAATTGAATACAAGGGGAAAAAGGACATTTGTGTAGTGGAGTCAAAGGTCACAATTGTTGCTTGTGGAGCACTTAGTACTCCAGCATTGCTTAAAAGAAGTGGATTGAAGAATGAAAACATAGGGAGAAACTTGCACCTTCATCCAGTGGCAATGGCTTGGGGCTACTTCCCTGATTCACCTTCACCTGAGTTGTGGCCTGAGAAACATAAGAAGAGCTATGAAGGAGGGATTATGACAGCAATGTCCACAGTTGTTGCACAGTTTGACAAATCTGGATATGGTACAGTGATCCAGACACCTGCATTGCATCCTGGTATGTTCTCAATTCTAATGCCATGGACTTCTGGTGCGGATATAAAAGATCGAATGCGCAAGTTCTCTAGAACGGCTCATGTGTTTGCGCTGGCAAGGGATCAAGGATCAGGAACTGTGAATTCGCCTTCGTGTATAAGTTATCAGTTGAAAGACATTGACAAAGAGAATTTAAAGGTTGGACTTGAGAAGGTACTGAGGATTCTTGCAGCAGCTGGAGCTGAAGAAATTGGGACACACAACAACAAGGGAAGGAGAATAAATGTGAAGCAAGTGAGCTATCATGAGTTTGAGAAATTTGTGAAAGAGGAAAGTTCAATGTCTTTGACAGACATTTCAACCCCATTGTGTTCAGCACATCAAATGGGAAGCTGTAAAATGGGTACTAATCCAAGGGAATCAGTTGTGAACCAAATGGGAGAGACATGGGAAGTGGAGGGTCTTTATTTGGCAGACTCAAGTGTGTTTCCCACAGCTTTGGGTGTGAATCCAATGGTCACTGTTCAGGCTATTTCTTACTGCACAGCACAATATGTTCTTGAAGTTCTTAGAAGGAAAAGAAAGTGA 2475 0.44 MNRKNMESNGESHSSRSGSFREGFGLAPNEAKVHTLVELGSVDYTHTTTTSLLQDGDDDDVGEEREKEQRKPLTNSLSPRQMKSLVALCDTLLPSINNNNVVWGSDDESVANFYKTSASLAGTPEHLGILISEKLKHPSTWLLLLTLWLLSTWFGTFILCGTLSLSTKFPFFHSYPELSLLKRQKVMQSWSLSYLRPLRMFFRTIKLLTLLVFFTQLDEAEDNPSWKAIGYCGPDPEFKSQLKNHFFTKQRGQEEKEDDGTEDVRGPLYKGLIRINNPRDIITDSLRRVGFSVSATPKKTKASTLSSPSLVIKCDAVVVGSGSGGGVVAGVLANAGYKVLVLEKGSYSARNNLSLLEGPSMDQMYLSNGLVATNDMSVLILAGSTVGGGSAINWSASIRTPQHVCKEWCDRHELELFESMLYKEALDVVCEKMGVQSEIDDEGFNNAVLRRGCVEMGYPVCNIPRNATSDHYCGWCCLGCKDGRKKGTLETWLVDLVKSGNGAIIPSCEAIQVLHKKKKGRHRKIARGVAFAIEYKGKKDICVVESKVTIVACGALSTPALLKRSGLKNENIGRNLHLHPVAMAWGYFPDSPSPELWPEKHKKSYEGGIMTAMSTVVAQFDKSGYGTVIQTPALHPGMFSILMPWTSGADIKDRMRKFSRTAHVFALARDQGSGTVNSPSCISYQLKDIDKENLKVGLEKVLRILAAAGAEEIGTHNNKGRRINVKQVSYHEFEKFVKEESSMSLTDISTPLCSAHQMGSCKMGTNPRESVVNQMGETWEVEGLYLADSSVFPTALGVNPMVTVQAISYCTAQYVLEVLRRKRK* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0610 824 MobiDBLite consensus disorder prediction 1 24 - -
Gso16g0610 824 Gene3D - 300 626 IPR036188 -
Gso16g0610 824 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 46 823 - -
Gso16g0610 824 MobiDBLite consensus disorder prediction 48 76 - -
Gso16g0610 824 SUPERFAMILY FAD/NAD(P)-binding domain 312 817 IPR036188 -
Gso16g0610 824 PIRSF Lg_Ch_AO 63 824 IPR012400 GO:0046577
Gso16g0610 824 Pfam GMC oxidoreductase 315 581 IPR000172 GO:0016614|GO:0050660
Gso16g0610 824 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 46 823 - -
Gso16g0610 824 Pfam GMC oxidoreductase 682 809 IPR007867 GO:0016614
Gso16g0610 824 Gene3D - 741 822 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0610 Gso-Chr16 7689854 7699960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0610 58 819 Acyl Lipid Metabolism Gene Families AT4G19380 58.508 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0610 K17756 - gmx:100778208 1593.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1303 1 49528757 49536510 Gso16g0610 16 7689854 7699960 PCT
Gso9g1801 9 42494412 42502676 Gso16g0610 16 7689854 7699960 PCT
Gso16g0610 16 7689854 7699960 Gso1g1303 1 49528757 49536510 PCT
Gso16g0610 16 7689854 7699960 Gso9g1801 9 42494412 42502676 PCT