Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1126 ATGGCTAGTTTGTCAACTAGGATTTTCTTCATCATGTCCCTTGTGTGCCTGGCTCTCGGTCCAATGGCACAAGGGGAAATGACATGTGGCCAGGTTGTGAGCAACCTGACCCCATGCATCTCCTATGTGGTGTATGGTGGAACCAATGTTCCTGAACAGTGCTGCAATGGGATAAGAAATCTCTATGGCATGGCTCAGACCAAACCAGACCGCCAAGCTGTTTGCAACTGCATCAAGAACGGTGTTAGGAACAGTGGCTTCAACTACTCTGACTTCAACCTCAACCTTGCTGCTAACCTTCCCAAGAAATGTGGGGTCAACATTCCCTACCAGATCAGCCCCAACACAGACTGCACTAGGGTGCAGTGA 369 0.4959 MASLSTRIFFIMSLVCLALGPMAQGEMTCGQVVSNLTPCISYVVYGGTNVPEQCCNGIRNLYGMAQTKPDRQAVCNCIKNGVRNSGFNYSDFNLNLAANLPKKCGVNIPYQISPNTDCTRVQ* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1126 122 ProSitePatterns Plant lipid transfer proteins signature. 100 121 IPR000528 GO:0006869|GO:0008289
Gso1g1126 122 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 121 IPR036312 -
Gso1g1126 122 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Gso1g1126 122 PRINTS Plant phospholipid transfer protein signature 49 63 IPR000528 GO:0006869|GO:0008289
Gso1g1126 122 PRINTS Plant phospholipid transfer protein signature 91 108 IPR000528 GO:0006869|GO:0008289
Gso1g1126 122 PRINTS Plant phospholipid transfer protein signature 109 120 IPR000528 GO:0006869|GO:0008289
Gso1g1126 122 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 10-RELATED 9 120 - -
Gso1g1126 122 Pfam Protease inhibitor/seed storage/LTP family 29 118 IPR016140 -
Gso1g1126 122 SMART aai_6 29 118 IPR016140 -
Gso1g1126 122 CDD nsLTP1 28 119 - -
Gso1g1126 122 Gene3D - 26 122 IPR036312 -
Gso1g1126 122 PANTHER - 9 120 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1126 Gso-Chr1 45720795 45722404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1126 11 122 Acyl Lipid Metabolism Gene Families AT2G38540 46.218 2.95e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1126 - - gmx:100499726 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1126 1 45720795 45722404 Gso3g0306 3 4559051 4560397 GST