Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1113 ATGGAAGAAGTTCCCGACACGGCGGCGAACCGGTCCGAGCCGGGGCTCAGGGCGGAGATCGACACATCGGCGCCGTTCGAATCGGTGAGGGAAGCCGTCACGCGATTCGGTGGAGTTGGGTATTGGAAACCCATTCTCAACGGTCTTAGTAACAAGCATTTTGCGGCCACTGAGCCGCATCACACAGAAGAGCTTGACCCTGAAAAACTGGAGGAGCAAGCTACTGTATTGGAGAAAGAGCTGATCCTGAAAGAAAGGGAAACACTTGATGTCTTAAAAGAGTTGGAAAGTACCAAAAGGCTTGTAGAGAATTTGAAATCAAAGCTACAGAAAGAAGAATCGGAAGCGAATTTGAATTTTCAGACAAGTGTTTGCGAAAATATATTGTCTGTTAAGGAGGATGAGAAAGAAGATAAGGAAAACGGAATGAGTAATGTTGTTCAGGATTCAAAGGAAGGTTGTACCCCCTATACTTCATCATCCCCGGGTTTAATATTAATGGAATTGAAGCAAGCGAAATTCAATCTGAACAGAACTACAAGTGATATTGCTGATGTTCGTGCTTCTGTTGAATCGCTCAATAAGAAGTTAGAGAAGGAAAGACTATCACTTGAGAAAACGCGCAAGAGGTTAACTCAGAATTCTTCAAAGATATGTTCTCTTGAGGAAGAGCTAAACCAGACAAAACTAAAACTGCTAGTGGCAAAGGATGCCGATTTGGATAACCCTTCGGATATTACAAGAGAGCTCCAGCGGCTGAGTTCTGAGGCCGAACATTTCAAGAAAATGGGAGAAGCTGCTAAATCAGAAGTCATGAAAGCAATATCTGAGATTGAACAAACAAAAGCTATGATAAAAACTGCTGAAATCAGGTTGGTTGCTGCCCGAAAAATGAAGGAAGCTGCCAGAGCAGCAGAAGCTGCCGCCCTTGCAGAGATCAAAGCTTTGTCTCATCATGAGAATTCACCTGGAGATTGTGTGGAAAAGCATGATGGAGTGACCCTTTCCTTTGAAGAGTATACTGCTCTAACCTGCAAGGTGCGAGAGGCCGAGGAGCAATCTAAGAAGAGAGTTGTAGATGCTATGCTTCTAGTTGATGAAGCAAATGTATCTAAAATGGACATTTTGAAAAAGGTAGAGGAAGCCACAGAAGAAGTTAAAATCAGCAAGAAGGCCCTTGATGATGCTCTTGAAAGGGTAGAGGCTGCTAATCAAGGAAAGCTAGCAGTTGAAGAGGCGTTAAGGAAGTGGCGGTCGGAGGGTCACAAACGGCGTTCTTCCATACATAACTCTATCAAGTTTAAAAATGCTTACCCCTCTCACCATTGGAAGGAATCTCGGTTAATCGATGTCAATGGGTTGAATCTGGTAAATGATGAGGTCAAGCCGGTTCTAAAGCCAACACTGTCCATAGGACAAATATTGAGCAGGAAGTTGATGATGCCGGAAGAGTATGAAGCCAGTGGAATGATTAGAGAAAGAAGCTCGGCGAAACGGAAGGTGTCTCTTGGTCAGATGCTAGGCAAACAAAACGGGGATTCATCCTTTGACAGGCAAGCTGAGAAGGAAAATGGTCAGAAACCGTTTTCTGCAAAGAGAAAGAAATTTGGATTTGGTCGATTCTCCCTACTTTTGACAAAACAACAAAAGAAGAAGAAGCCAACACTGAACTTGAGGTGA 1680 0.4375 MEEVPDTAANRSEPGLRAEIDTSAPFESVREAVTRFGGVGYWKPILNGLSNKHFAATEPHHTEELDPEKLEEQATVLEKELILKERETLDVLKELESTKRLVENLKSKLQKEESEANLNFQTSVCENILSVKEDEKEDKENGMSNVVQDSKEGCTPYTSSSPGLILMELKQAKFNLNRTTSDIADVRASVESLNKKLEKERLSLEKTRKRLTQNSSKICSLEEELNQTKLKLLVAKDADLDNPSDITRELQRLSSEAEHFKKMGEAAKSEVMKAISEIEQTKAMIKTAEIRLVAARKMKEAARAAEAAALAEIKALSHHENSPGDCVEKHDGVTLSFEEYTALTCKVREAEEQSKKRVVDAMLLVDEANVSKMDILKKVEEATEEVKISKKALDDALERVEAANQGKLAVEEALRKWRSEGHKRRSSIHNSIKFKNAYPSHHWKESRLIDVNGLNLVNDEVKPVLKPTLSIGQILSRKLMMPEEYEASGMIRERSSAKRKVSLGQMLGKQNGDSSFDRQAEKENGQKPFSAKRKKFGFGRFSLLLTKQQKKKKPTLNLR* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1113 559 Coils Coil 92 115 - -
Gso1g1113 559 MobiDBLite consensus disorder prediction 135 155 - -
Gso1g1113 559 Coils Coil 365 399 - -
Gso1g1113 559 Gene3D - 165 321 - -
Gso1g1113 559 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 9 553 - -
Gso1g1113 559 Pfam Weak chloroplast movement under blue light 167 424 IPR008545 -
Gso1g1113 559 Pfam Weak chloroplast movement under blue light 18 117 IPR008545 -
Gso1g1113 559 MobiDBLite consensus disorder prediction 507 534 - -
Gso1g1113 559 PANTHER MYOSIN HEAVY CHAIN-LIKE 9 553 - -
Gso1g1113 559 Coils Coil 278 305 - -
Gso1g1113 559 MobiDBLite consensus disorder prediction 1 23 - -
Gso1g1113 559 MobiDBLite consensus disorder prediction 515 530 - -
Gso1g1113 559 Coils Coil 176 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1113 Gso-Chr1 45238529 45241529 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1113 - - gmx:100783770 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1113 1 45238529 45241529 Gso3g0318 3 4811265 4814305 GST
Gso18g1708 18 49429043 49432692 Gso1g1113 1 45238529 45241529 PCT
Gso1g1113 1 45238529 45241529 Gso18g1708 18 49429043 49432692 PCT