Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1708 ATGCTTTTTGGTTCCGTTTGTTTTGTGATGGAAATGGAAGCCGCTGACGTGGTCGAAACGACGACGAATCATGCCGAACGGGGTTTGGAGAAGAAGAACAACAAGAGTGGTTTGAGAACGGAGATTGATACTTCAGCGCCCTTTGAATCGGTGAAGGAAGCTGTTACTATGTTCGGGGGTGGTTACTGGAAATCACCCCTTCACAGTAATATTACGTGTGTGGCTTCTGGTTCTGAGCACCACAGAGAAGAGGTCAGCGCTGAAAAACTGGAGGAGCAGGCTGTGGTATTGGAGAAAGAACTGATCTTGAAAGAAAGGGAAACTCTTGATGTGTTGAAAGAACTGGAAAGTACCAAAAGGCTTGTTGAAGATTTGAAATCAAAGATACAGAAGGAAGAGTCTGAAGCAAATTTGAATCTTCAGATGGGAAAATATGATAAGAAATCGGTTGTTGATGAGAATGTAGAAAAGGAAAACCAAATGAGTCAATTGAATGTTCTTCAACCTTCCAGGGAAGGTTTTATCCCCTACCCTTCATCTACTCCAGGCTTAATACTAATGGAATTGAAGCAGGCCAAATTGAATTTAACTAAAACTACTAATGACCTTGCTGACGTCCAAACTTCTGTTGAATCGCTTAATAAGAAGTTAGAGAAGGAAAGAATCTCACTTGAGAAAACACGTGATAGGTTAGCTCAAAATACTTTGAAGATATCTTCTCTCGAGGAAGAGCTAAACCAGACCAGATTAAGGCTTCAAATAGCAAAAGATGCTGAAATTAAAGGTGCTTTAGATGACCCTTCAGATATTACAAGAGAGCTCCAGCAATTAAGTTCTGAGGCAGAGAATTTCAAAAGAATGGGAGAATTTGCAAAATCAGAAGTTTTGAGATCAATGTCTGAGATTGAACAGACAAAAACCATGATAAGAACTGCTGAAATCAGATTGCTAGCAGCCAGAAAAATGAAAGAAGCCGCTAGAGCTGCCGAAGCTTTTGCCCTTGCAGAAATTAATGCTCTATCTAATCATGACAGTTCACCTGGAAATCAGGTTACTCTTTCATTTGAGGAGTATACTGCTCTGATGGGCAAAGCTCGAGATGCAGAGGAACAATCTAAGAAGAGAGTTGCAAGTGCTATGCTTGAAGTTGACGAAGCAAATTTAGCAAACATGGACATTTTGAAAAGGGTAGAAGAAGCTACAGGACAAGTTAAAACCAGCAAGAAGGCCCTTGAAGAAGCTCTAGAAAGGGTAGAAGCTGCAAATAGAGACAAGGTAGCAGTTGAAGAGGCTTTAAGGAATTGGCGGTCCGAGGGTCAAAAAAAGCGTTCTTCTATACACAACTCTACTAAGTTCAAAAACTGTTGCTTGTCTCATCATCGGAGAGATCCTCGATTACTCGATGTGAATGGAATGCATTTGGTAAATGATGAAGCCAGGCCAGTTCTAAAGCCAACCCTATCAATAGGACAAATACTTAGCAGGAAGCTGCTTCAACCACAAGAGTTTGAAGCCAGAGAAGGAATCTCGATGAAACAGAATGTGTCACTGGGTAAGATGCTTGGCAAACAGAACAATGATCGGCCAGTTGACAGACAAGTTGAGAAAGAAACTGGCCATAAGCTGTTTTCTACCAAGAGAAAGAAATTTGGATTTGCACGATTCTCACATATATTGTCAAAACAGAAGAAGAAGAAGCCAACCCTGAATTTGAGGTGA 1719 0.409 MLFGSVCFVMEMEAADVVETTTNHAERGLEKKNNKSGLRTEIDTSAPFESVKEAVTMFGGGYWKSPLHSNITCVASGSEHHREEVSAEKLEEQAVVLEKELILKERETLDVLKELESTKRLVEDLKSKIQKEESEANLNLQMGKYDKKSVVDENVEKENQMSQLNVLQPSREGFIPYPSSTPGLILMELKQAKLNLTKTTNDLADVQTSVESLNKKLEKERISLEKTRDRLAQNTLKISSLEEELNQTRLRLQIAKDAEIKGALDDPSDITRELQQLSSEAENFKRMGEFAKSEVLRSMSEIEQTKTMIRTAEIRLLAARKMKEAARAAEAFALAEINALSNHDSSPGNQVTLSFEEYTALMGKARDAEEQSKKRVASAMLEVDEANLANMDILKRVEEATGQVKTSKKALEEALERVEAANRDKVAVEEALRNWRSEGQKKRSSIHNSTKFKNCCLSHHRRDPRLLDVNGMHLVNDEARPVLKPTLSIGQILSRKLLQPQEFEAREGISMKQNVSLGKMLGKQNNDRPVDRQVEKETGHKLFSTKRKKFGFARFSHILSKQKKKKPTLNLR* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1708 572 Coils Coil 196 258 - -
Gso18g1708 572 Coils Coil 397 438 - -
Gso18g1708 572 Coils Coil 274 294 - -
Gso18g1708 572 Coils Coil 80 107 - -
Gso18g1708 572 Pfam Weak chloroplast movement under blue light 187 441 IPR008545 -
Gso18g1708 572 Pfam Weak chloroplast movement under blue light 40 136 IPR008545 -
Gso18g1708 572 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 22 568 - -
Gso18g1708 572 PANTHER MYOSIN HEAVY CHAIN-LIKE 22 568 - -
Gso18g1708 572 Coils Coil 112 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1708 Gso-Chr18 49429043 49432692 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1708 - - gmx:100785049 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1708 18 49429043 49432692 Gso1g1113 1 45238529 45241529 PCT
Gso18g1708 18 49429043 49432692 Gso3g0318 3 4811265 4814305 PCT
Gso1g1113 1 45238529 45241529 Gso18g1708 18 49429043 49432692 PCT
Gso3g0318 3 4811265 4814305 Gso18g1708 18 49429043 49432692 PCT