Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1105 ATGGCTAGTTTTACTAAGTTAGCATGCATGGTTCTGGCGTGCATGGTCGTGATGGTTGCACACAACACTGTCCAAGGCATCAGGTGTGGCCAGGTTCAGGGTAACCTAGCACCGTGCCTAGGGTTTCTCCAGAACGGTGGAGCTGTTTCCAGAGGATGCTGCAACGGGGTCAGGAGTATTGTGAACAATGCCAGGACCACTGGTGATCGCCGTGCTGTTTGCAACTGCTTGAAGATAGCTGCTGGTGCTGTTCGGAAGCTCAACCCTTACAATGCTCAGGCTCTCCCCGGGAAATGTGGGGTCAACATACCCTACAAGATCAGCACCTCCACCAACTGTAACAGCATCAAGTGA 354 0.5254 MASFTKLACMVLACMVVMVAHNTVQGIRCGQVQGNLAPCLGFLQNGGAVSRGCCNGVRSIVNNARTTGDRRAVCNCLKIAAGAVRKLNPYNAQALPGKCGVNIPYKISTSTNCNSIK* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1105 117 Gene3D - 26 117 IPR036312 -
Gso1g1105 117 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 115 - -
Gso1g1105 117 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 116 IPR036312 -
Gso1g1105 117 CDD nsLTP1 27 114 - -
Gso1g1105 117 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Gso1g1105 117 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Gso1g1105 117 PRINTS Plant phospholipid transfer protein signature 69 84 IPR000528 GO:0006869|GO:0008289
Gso1g1105 117 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Gso1g1105 117 PRINTS Plant phospholipid transfer protein signature 104 115 IPR000528 GO:0006869|GO:0008289
Gso1g1105 117 Pfam Protease inhibitor/seed storage/LTP family 29 113 IPR016140 -
Gso1g1105 117 PANTHER - 1 115 IPR000528 GO:0006869|GO:0008289
Gso1g1105 117 SMART aai_6 29 113 IPR016140 -
Gso1g1105 117 ProSitePatterns Plant lipid transfer proteins signature. 95 116 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1105 Gso-Chr1 44987554 44989712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1105 1 117 Acyl Lipid Metabolism Gene Families AT2G38530 51.695 5.04e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1105 - - gmx:100776812 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1105 1 44987554 44989712 Gso3g0338 3 5146636 5148408 GST
Gso18g1702 18 49338936 49340500 Gso1g1105 1 44987554 44989712 PCT
Gso1g1105 1 44987554 44989712 Gso18g1702 18 49338936 49340500 PCT