Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1090 ATGAAGAAGCAGAAGCGCTCGGACCCTCAAAACGACACCACTAACCCCTTCGAGGTTCTCACGGAGGAGCTAATGTTCGTGATCCTGGACTTCCTCGAAACGGCGGCGCCGTTGGATAAAAAATCCTTCTCGCTGACGTGTAAGTGGTTTTACTCCCTTGAGGCAAAACACCGTCGTTTGCTTCGGCCGTTACGGGCAGAGCACCTGCCCGCGCTCGCAGCCCGCTACCCGAGCGTAACGGAACTAGATCTCTCGCTGTGCCCGCGCGTGGGCGACGACGCGCTCGCGCTCGTCGCCGGCGCGTACGCGGCGACGCTGCGGCGGCTGGACCTGTCACAGTCGCGGCGGTTCACAGGGAGCGGGCTTATGAGCCTCGGCGCGCGGTGCGAGTACTTGGTGGAGTTGGACTTGTCGAACGCGACGGAGCTGAGGGACGCCGGCGTCGCGGCGGTGGCGCGTGCGCGGAACTTGCGGAGGCTGTGGCTGGCGAGGTGTAAGAACGTGACGGATATGGGGATTGGGTGTATTGCGGTGGGGTGCAGGAAGCTGAGGGTGATTTGCTTGAAGTGGTGTGTTGGGATTGGGGATTTGGGCGTGGATTTGGTTGCAATTAAGTGTAAGGAGCTCACAACATTGGATCTCTCTTATTTGCCTATCACGGAGAAATGTCTGCCGTCGATCTTCAAATTGCAACATCTTGAAGATTTGGTCCTCGAAGGATGCTTTGGCATTGATGACGACAGCCTCGATGTTGATCTCTTAAAACAAGGGTGCAAGACATTAAAGAAACTTGATATCTCAGGTTGTCAAAACATAAGTCACGTTGGGTTATCAAAGCTAACAAGCATTTCTGGAGGTTTAGAGAAACTCATTTCAGCAGATGGTTCTCCTGTCACTCTTTCTCTTGCTGATGGTTTGAATAAACTTTCAATGTTGCAATCAATTGTATTAGATGGCTGCCCTGTTACTTCTGAAGGATTAAGGGCCATTGGAAATTTGTGCATTTCACTTAGGGAGCTTAGTCTAAGCAAATGTTTGGGAGTGACAGATGAAGCACTCTCGTTCCTTGTGTCAAAACACAAAGATTTAAGGAAGCTTGACATCACATGCTGTCGCAAGATAACTGATGTTTCCATTGCCAGCATTTCTAATTCGTGCGCAGGTCTAACTTCTCTCAAAATGGAATCATGTACACTAGTTCCAAGTGAAGCATTTGTCTTGATTGGAGAGAAATGCCATTATATTGAGGAGCTTGACCTAACAGATAATGAAATTGATGATGAAGGTCTTATGTCCATTTCTTCTTGTTCTAGGCTCTCCAGCTTGAAAATAGGAATATGCCTGAACATAACTGACAGAGGACTTACCTATGTTGGCATGCATTGCTCAAAATTAAAGGAGCTGGATCTATACAGGTCTACAGGGGTAGATGATTTGGGCATTTCAGCAATTGCTCGGGGTTGCCCTGGCCTTGAGATGATAAATACATCCTATTGTACTAGCATTACTGACAGGGCACTAATCACCTTGTCAAAATGTTCAAATTTGAAGACACTTGAAATTCGAGGATGTCTTCTTGTTACATCCATAGGTCTGGCAGCTATTGCAATGAATTGCAGACAACTAAGTCGTCTAGACATAAAAAAGTGTTACAACATTGATGACAGTGGGATGATTGCACTAGCTCATTTCTCCCAAAATCTAAGACAGATAAATTTGTCATATAGCTCAGTTACAGATGTGGGGCTTCTGTCACTTGCTAATATCAGCTGCCTTCAAAGTTTTACTGTGCTTCACCTGCAAGGCTTGGTTCCAGGAGGACTGGCTGCAGCCTTATTAGCATGTGGAGGGCTAACAAAAGTGAAGCTTCATCTTTCACTAAGACCTCTGTTACCTCAGCTACTTATCAGACATGTAGAATCACGTGGCTGTGTGTTTGAATGGAGAGATAAAGAGTTTCAGGCTGAATTGGACCCAAAGTGTTGGAAATTACAGTTAGAAGATGTGATGCTATAG 2016 0.4702 MKKQKRSDPQNDTTNPFEVLTEELMFVILDFLETAAPLDKKSFSLTCKWFYSLEAKHRRLLRPLRAEHLPALAARYPSVTELDLSLCPRVGDDALALVAGAYAATLRRLDLSQSRRFTGSGLMSLGARCEYLVELDLSNATELRDAGVAAVARARNLRRLWLARCKNVTDMGIGCIAVGCRKLRVICLKWCVGIGDLGVDLVAIKCKELTTLDLSYLPITEKCLPSIFKLQHLEDLVLEGCFGIDDDSLDVDLLKQGCKTLKKLDISGCQNISHVGLSKLTSISGGLEKLISADGSPVTLSLADGLNKLSMLQSIVLDGCPVTSEGLRAIGNLCISLRELSLSKCLGVTDEALSFLVSKHKDLRKLDITCCRKITDVSIASISNSCAGLTSLKMESCTLVPSEAFVLIGEKCHYIEELDLTDNEIDDEGLMSISSCSRLSSLKIGICLNITDRGLTYVGMHCSKLKELDLYRSTGVDDLGISAIARGCPGLEMINTSYCTSITDRALITLSKCSNLKTLEIRGCLLVTSIGLAAIAMNCRQLSRLDIKKCYNIDDSGMIALAHFSQNLRQINLSYSSVTDVGLLSLANISCLQSFTVLHLQGLVPGGLAAALLACGGLTKVKLHLSLRPLLPQLLIRHVESRGCVFEWRDKEFQAELDPKCWKLQLEDVML* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1090 671 Gene3D Ribonuclease Inhibitor 405 657 IPR032675 -
Gso1g1090 671 Gene3D Ribonuclease Inhibitor 143 290 IPR032675 -
Gso1g1090 671 PANTHER F-BOX/LRR-REPEAT PROTEIN 3 2 613 - -
Gso1g1090 671 PANTHER UNCHARACTERIZED 2 613 - -
Gso1g1090 671 Gene3D Ribonuclease Inhibitor 62 142 IPR032675 -
Gso1g1090 671 Gene3D Ribonuclease Inhibitor 291 404 IPR032675 -
Gso1g1090 671 Pfam Leucine Rich repeat 565 587 IPR001611 GO:0005515
Gso1g1090 671 Pfam Leucine Rich repeat 512 536 IPR001611 GO:0005515
Gso1g1090 671 Pfam Leucine Rich repeat 362 382 IPR001611 GO:0005515
Gso1g1090 671 Pfam Leucine Rich repeat 411 434 IPR001611 GO:0005515
Gso1g1090 671 Pfam Leucine Rich repeat 258 280 IPR001611 GO:0005515
Gso1g1090 671 SUPERFAMILY RNI-like 109 555 - -
Gso1g1090 671 SMART LRR_CC_2 180 205 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 412 436 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 258 283 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 206 230 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 76 101 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 462 487 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 565 589 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 514 538 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 103 128 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 155 179 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 309 333 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 437 461 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 386 411 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 360 385 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 129 154 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 334 359 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 539 564 IPR006553 -
Gso1g1090 671 SMART LRR_CC_2 488 513 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1090 Gso-Chr1 44539989 44545271 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1090 K10268 - gmx:100812083 1261.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1090 1 44539989 44545271 Gso16g0642 16 8247823 8248806 PCT