Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0642 ATGGATTATGATAGATGGTCTGGACCTTCAGGCGTACCTAAAGCTTATTTTGATGATTGCTTTGAAACAATTTTAAAGCCTCGATTTTATTTTAAGATTAATGAAGCTAGTGCAAAACGGTATTGCAAATTGAGTATGGGAAGAAAATGGGCTGCAAATAGGCAAAGCTTATGGAATGAATTCAACGATCCAACCAAAACAAGAGATGAAATCATAAAAAATGTGCCGATAGGCATAGATAAAGATCAATGGGCTCGTTTTGTTCATTATCGTCATAAACCATCAACATTGGAACTTTGTAGGAGAAATAAAGAAATTCGAAGCAAGCAAGTTATTCCACACACTGGTGGATCCAAAGCTAATCCTAGAAGAAGAAATGAGTTGTTGTTAGAAACTGGGAAGCTACCAAGTCGTGGACAATTATATATTGAAACTCATAAAAGGAAAGATCGGTCATTTGTAAATGAAGCAACAAAGACTGTAGCGGAACAAATTGAAGTAGGATTGACTCAAAGCATAGTTGATGAATATGAAGTTTCTCCTCTTGATGCTGTTGGAACACAAGACTTCAAGCTTCTAGTCTGA 585 0.3607 MDYDRWSGPSGVPKAYFDDCFETILKPRFYFKINEASAKRYCKLSMGRKWAANRQSLWNEFNDPTKTRDEIIKNVPIGIDKDQWARFVHYRHKPSTLELCRRNKEIRSKQVIPHTGGSKANPRRRNELLLETGKLPSRGQLYIETHKRKDRSFVNEATKTVAEQIEVGLTQSIVDEYEVSPLDAVGTQDFKLLV* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0642 194 PANTHER OS10G0409366 PROTEIN-RELATED 2 186 - -
Gso16g0642 194 PANTHER - 2 186 - -
Gso16g0642 194 Pfam Plant transposase (Ptta/En/Spm family) 80 171 IPR004252 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0642 Gso-Chr16 8247823 8248806 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0642 - - gmx:100797980 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1090 1 44539989 44545271 Gso16g0642 16 8247823 8248806 PCT