Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1087 ATGGAGCCTAACGTAGGGAAGCCTGGCTTTCTCCGAAACGTTCTGGTACGGTTACTCCTCTTCGGCGTTTTCATCGTCGTCGTTCGGTTCGCTTACGTCATCACCCTCGCCGGCGAGTCCTGCTCCGTCGGCGACTTCTGCTTCTTCTCTCCGTCGATCAACCTCGCCAAGGCCGGCACTAGATCCGGCGCTCTCGCCGCCCAGGCCGCCGTCGGAGGCGCCGGCGCGGCACCGGAGCGCTACGCCAGCAAGGAATGGATCAATGGTGTCCGGTTCTACTCGTCGGCGTTTCAGGACATGATCTCCGGCGGCTTCCTCTCGCCGGCGGCGAAGGCGCTCTGCGTGGAGACGCCGACCGGCCGCGACGTCATGGCGCTGCGCGGGATCGGAGTAATCGACGCCGTCGGGATCTCGAAGAAGGCGTCGCCGCCGCTGGTGAAGTCCGGCGAGGCTCGCCGGATTCCGTTCGCGGACGACACATTCGATTTCATGTTCGCCGGCGACGGCGCGCTAGAAAATTCGCCGCGGCCGGCGGATTTTGCAGCCGAAATCTTTCGGACGCTCAAACCCGAAGGGTTTGCCGCGTTCCATGTAAAGGCCAATGACACTTACAGTTACAATTCATTCGTTGATTTGTTCAATTTTTGTTGCAATGTGGTGAAAGTAAACGACATATTAGAGTTTGATTCATCGATGCCTCACATAAGAGAAATCGTTGTGAAGAAAGTGCGTCACGCAATTGATTCTGAATCCAATTCCAATGGAAAATGCTCTGTTCCAGAGTACAAAAAAAAGCAGGTGAGAAATGCAGAGGCTTTGATTGAAGAGGAGCCACTGAAGCCATGGATCACTCTGAAGAGAAACGTGAAGAACATAAAGTACCTATCTTCAATGGTTGATATAAGCTTTAAGGATAGGTATGTGTATATTGATGTTGGAGCTAGAAGCTATGGCTCCAGCATTGGAAGTTGGTTTAGGAAGCAGTACCCGAAACAGAACAAGACCTTTCATGTGTATGCAATTGAGGCTGATAAAACGTTTCATCAGGAGTATGGAACGAAAAAGGGTGTTACATTGCTGCCTTATGCAGCATGGGTGAGGAATGAGAGTTTGGTGTTTGAGATTAACCGCGACCCGGGGGAGAAGAAGGTTCAGGGGAAGGGCAGGGGAATGGGGAGGATTCAGCCATTGAAGTCTTCAGGTGGTTTTGATGGTGGTGAGCTTGAGAAGATTTCGGGGTTTGATTTCGCTGAATGGTTGAAGAATACGGTTTCGGAGAACGATTTTGTTGTGATGAAGATGGATGTGGAGGGTACTGAGTTTGATTTGATTCCAAGGTTGTTTGAAACTGGGGCTATCTGTTTGGTGGATGAGATTTTTCTGGAGTGCCATTACAATAGGTGGCAGAGGTGTTGCCCTGGGCAGAGGAGTCCCAAGTATGAGAAAACTTATGATCAGTGCTTGCAGCTCTTCACTTCTCTCAGACAAAGTGGAGTTCTTGTTCATCAATGGTTTTAA 1518 0.5092 MEPNVGKPGFLRNVLVRLLLFGVFIVVVRFAYVITLAGESCSVGDFCFFSPSINLAKAGTRSGALAAQAAVGGAGAAPERYASKEWINGVRFYSSAFQDMISGGFLSPAAKALCVETPTGRDVMALRGIGVIDAVGISKKASPPLVKSGEARRIPFADDTFDFMFAGDGALENSPRPADFAAEIFRTLKPEGFAAFHVKANDTYSYNSFVDLFNFCCNVVKVNDILEFDSSMPHIREIVVKKVRHAIDSESNSNGKCSVPEYKKKQVRNAEALIEEEPLKPWITLKRNVKNIKYLSSMVDISFKDRYVYIDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKTFHQEYGTKKGVTLLPYAAWVRNESLVFEINRDPGEKKVQGKGRGMGRIQPLKSSGGFDGGELEKISGFDFAEWLKNTVSENDFVVMKMDVEGTEFDLIPRLFETGAICLVDEIFLECHYNRWQRCCPGQRSPKYEKTYDQCLQLFTSLRQSGVLVHQWF* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1087 505 PANTHER METHYLTRANSFERASE 1 505 - -
Gso1g1087 505 PANTHER METHYLTRANSFERASE 1 505 - -
Gso1g1087 505 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 294 447 IPR029063 -
Gso1g1087 505 Gene3D Vaccinia Virus protein VP39 291 469 IPR029063 -
Gso1g1087 505 Pfam Methyltransferase FkbM domain 311 471 IPR006342 -
Gso1g1087 505 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 148 207 IPR029063 -
Gso1g1087 505 Gene3D Vaccinia Virus protein VP39 133 277 IPR029063 -
Gso1g1087 505 Pfam Methyltransferase domain 147 196 IPR013216 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1087 Gso-Chr1 44493357 44495463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1087 - - gmx:100811015 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1681 18 48921598 48923814 Gso1g1087 1 44493357 44495463 PCT
Gso1g1087 1 44493357 44495463 Gso18g1681 18 48921598 48923814 PCT