Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1681 ATGGAACCTACCGCAGGGAAGCCCGGTTCTCTCCGGAACCTTCTGATACGGTTTCTCCTCTTCGGCGTTTTGGTCATCGGCGTTCGTTTCGCTTACCTCATCGCCGTCGCCGGCGAGTCCTGCACCATAGACGACTTCTGTTTCTTCTCTCTGCCGGACACTCTCAGCCTCGTCATTGCCGGCACTGGACCTCTCGCCGTCGAGTCTGCCTCCGCCGCCGGCGGTTTGGTGCAGCCGGAGCTTTACACCAGCAAGGACTGGATCAACGGCGTTCGGTTCTACTCGTCAGCGTTCCAGGACCTCATCGCCGGCGGCTACCTCTCGCCGGAGTCGAAGACTCTGTGCGTGGAGACGCCGACCGGACGCGACGTATTCGCGCTGAGGGAGATCGGCGTGAAGGATGCCGTCGGAATCGCGAGAAAGGCGGCGAAGCCTCTCGTGAAGTTCGGCCGAGGCGAGCGGATTCCGTTCGGCGACGGAGCCTTCGACTTCGTGTTCTCCGGCGAGGACTCGTTCGTGAAGTCGGCGAAGCCGGCGGAGTTCGCGGCCGAGATCGGCCGGACACTGCGGCCGGGAGGTTTCGCGGTGTTCCATTTCGCAAACCCTAAAGATACGTATAGTTTTAATTCGTTCCTTGATTTGTTCAATTGTTTCAGAGTAGTGAAGTTGCATGGCTTGGAAGGATTCGATTCTTCGATGCCGTATATACGAGAAATTGTTTTGAAGAAAGAGTGTGGTGATGGTGCTGGAAAATTCGATTTCGATGATTCAAATGGAAAGTGTTATGTTCCTGGTTATAAGCATGATTTGGTTAAGATTGCTGAGCCTTTGATTGAGGAAGAGCCTTTGAAGCCTTGGATTACATTGAAAAGGAATGTGAGGAACATAAAGTACCTTCCTTCAATTGCTGATATAAGCTTTAAGAATAGGTATGTGTATGTTGATGTTGGAGCTAGAAGCTATGGCTCTAGCATAGGGTCTTGGTTTAGGAAGCAGTACCCTAAGCAGAACAAGACCTTTCATGTGTATGCAATTGAAGCTGATAAGACTTTCCATCAAGAGTATGGGTTGAAGAAGGGGATCACTTTGGTTCCTTATGCTGCGTGGGTTAAGAATGAAACCTTGATGTTTGAGATTCATCGCGATCCTGGGGAGCATGTTGAGGTTAAAGGCCGGGGGATGGGTAGGATTCAGCCTTTGCAATCGTCGGGGAGGGGGGAGTTTGATGGCGAAGTGGAGAAGATACAGGGATTTGATTTTGCTAATTGGTTGAAGAAGACGGTTTCAAAGAACGATTTTGTTGTGATGAAGATGGATGTGGAGGGTACTGAGTTCGATCTGATTCCAAGGTTGATTAAAACTGGGGCCATATGTTTGATAGATGAGATTTTCCTTGAATGCCATTACAATAGGTGGCAGAGATGTTGCCCTGGGCAGAGGAGTGCAAAGTATGAGAAAACATATGATCAATGCTTGCAGCTCTTCAAATCCCTTAGACAAAGTGGAGTTCTTGTTCATCAGTGGTTCTAA 1530 0.498 MEPTAGKPGSLRNLLIRFLLFGVLVIGVRFAYLIAVAGESCTIDDFCFFSLPDTLSLVIAGTGPLAVESASAAGGLVQPELYTSKDWINGVRFYSSAFQDLIAGGYLSPESKTLCVETPTGRDVFALREIGVKDAVGIARKAAKPLVKFGRGERIPFGDGAFDFVFSGEDSFVKSAKPAEFAAEIGRTLRPGGFAVFHFANPKDTYSFNSFLDLFNCFRVVKLHGLEGFDSSMPYIREIVLKKECGDGAGKFDFDDSNGKCYVPGYKHDLVKIAEPLIEEEPLKPWITLKRNVRNIKYLPSIADISFKNRYVYVDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKTFHQEYGLKKGITLVPYAAWVKNETLMFEIHRDPGEHVEVKGRGMGRIQPLQSSGRGEFDGEVEKIQGFDFANWLKKTVSKNDFVVMKMDVEGTEFDLIPRLIKTGAICLIDEIFLECHYNRWQRCCPGQRSAKYEKTYDQCLQLFKSLRQSGVLVHQWF* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1681 509 Gene3D Vaccinia Virus protein VP39 299 485 IPR029063 -
Gso18g1681 509 Pfam Methyltransferase FkbM domain 315 486 IPR006342 -
Gso18g1681 509 Pfam Methyltransferase domain 141 197 IPR013216 GO:0008168
Gso18g1681 509 PANTHER METHYLTRANSFERASE 54 509 - -
Gso18g1681 509 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 298 468 IPR029063 -
Gso18g1681 509 Gene3D Vaccinia Virus protein VP39 120 244 IPR029063 -
Gso18g1681 509 PANTHER METHYLTRANSFERASE DOMAIN PROTEIN 54 509 - -
Gso18g1681 509 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 105 225 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1681 Gso-Chr18 48921598 48923814 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1681 - - gmx:102670512 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1681 18 48921598 48923814 Gso1g1087 1 44493357 44495463 PCT
Gso1g1087 1 44493357 44495463 Gso18g1681 18 48921598 48923814 PCT