Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1080 ATGACTACTCAATTCGTCATTCTCTCCCTTCTCGTCTCTTGTAATACCCTCATTTACGCCAATGCCGAAGACACGGGTTTCGTGGGCTCACTAGATCACAAGGCATTGGGTTTAAAGAAGAAAGACAAGGTTAGCCATTTCCGGTTCTACTTCCACGAGACCTTCACCGGAAGCAACGCCACCACGGTCTTCGTGGTTCCGCCGCTCCCCCAGTACAGCTCCACCAGCTCCTTCGGGGCAATCGGGGTCATGGACAACGTCTTGACGGCGGGACCGGAGCGTACCTCGAAGGTGGTGGGGAGAGTGGAGGCCTTGGCCGCTGCCACGTCACAAACGGAGTTTAATTTATTGATATTTTTTAACTTCATATTAACCCAAGGGAAGTACAATGGGAGCACCATCACCGTGTTGGGGAGGAACCGCACCTCCCTAAAGGTTAGGGAGATTCCTGTGGTTGGAGGCACTGGGGTGTTTAGGTTTGCAACTGGGTATGCTGAAACTAACACCATCTTTTTTGATCCACAAACTAGGTCTACCATTGAGTACAACATCTATGTTTCTCATTATTAA 570 0.4982 MTTQFVILSLLVSCNTLIYANAEDTGFVGSLDHKALGLKKKDKVSHFRFYFHETFTGSNATTVFVVPPLPQYSSTSSFGAIGVMDNVLTAGPERTSKVVGRVEALAAATSQTEFNLLIFFNFILTQGKYNGSTITVLGRNRTSLKVREIPVVGGTGVFRFATGYAETNTIFFDPQTRSTIEYNIYVSHY* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1080 189 Pfam Dirigent-like protein 45 186 IPR004265 -
Gso1g1080 189 PANTHER NUCLEOPORIN-RELATED 2 188 IPR004265 -
Gso1g1080 189 Gene3D - 29 187 IPR044859 -
Gso1g1080 189 PANTHER DIRIGENT PROTEIN 7 2 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1080 Gso-Chr1 44201858 44202707 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1080 - - gmx:100806935 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1080 1 44201858 44202707 Gso3g0371 3 5772217 5773082 GST
Gso18g1676 18 48878497 48879365 Gso1g1080 1 44201858 44202707 PCT
Gso7g1337 7 19404377 19405522 Gso1g1080 1 44201858 44202707 PCT