Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1676 ATGTTCATCCAATTCCTCATCTTTTCCCTCCTCTTCACTCCCTTCACGATCATCTCCACCATAGCCCATGACACCGATGATTTTGTGCGCACATTAGACCGCAAAATGTTGGGTTTGGACGAAAAGAAAGAAAAGTTCATCCATTTCAGGTTCTATTGGCATGACGCGATGAGTGGACGCAACCCTTCTTCAGTTGAAGTTGTGCCACCACCTTTGAAGAACTCAACCACGCGCTTTGGATTGGTGAACATGCTCGATAACCCTTTGACTTTGGGACCTCAATTGAACTCCAAGTTGGTGGGGCAAGCACAAGGGTTCTATGCTTCCACGTCACAAAGTGAGTTTGTTTTGCTCATGGCTATGAATCTTGTCATCACCGAAGGAAAGTACAATGGCAGCACCATCACTATTTTGGGGAGAAACCCTATTTACTATGAGGAGAGGGAGATGCCCGTGATTGGTGGAAGTGGCCTCTTTCGATTTGCTAGGGGATATGCTAAACTTAGAACTTACTGGTTCTCACCCTCCACCAGAGATGCCATTGTTGAGTACAATGTCTTTGTTTTGCATTATTATTGA 579 0.4508 MFIQFLIFSLLFTPFTIISTIAHDTDDFVRTLDRKMLGLDEKKEKFIHFRFYWHDAMSGRNPSSVEVVPPPLKNSTTRFGLVNMLDNPLTLGPQLNSKLVGQAQGFYASTSQSEFVLLMAMNLVITEGKYNGSTITILGRNPIYYEEREMPVIGGSGLFRFARGYAKLRTYWFSPSTRDAIVEYNVFVLHYY* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1676 192 PANTHER DIRIGENT PROTEIN 1 190 - -
Gso18g1676 192 PANTHER NUCLEOPORIN-RELATED 1 190 IPR004265 -
Gso18g1676 192 Gene3D - 35 181 IPR044859 -
Gso18g1676 192 Pfam Dirigent-like protein 48 188 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1676 Gso-Chr18 48878497 48879365 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1676 - - gmx:100305740 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1676 18 48878497 48879365 Gso7g1337 7 19404377 19405522 GST
Gso18g1676 18 48878497 48879365 Gso1g1080 1 44201858 44202707 PCT
Gso18g1676 18 48878497 48879365 Gso3g0371 3 5772217 5773082 PCT
Gso1g1074 1 44013889 44014882 Gso18g1676 18 48878497 48879365 PCT
Gso3g0369 3 5724119 5725014 Gso18g1676 18 48878497 48879365 PCT