Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1055 ATGGCCCTTTCTTGCTCCAAAGTTTTAAGCTTTTATCTCTCGCCCGTTGTGGGTGGTGGTGATGTTCCGAAAAAGCTCACTTTTTCTTCTTTTTTGGGTCTTTCTAAGGGTGTTGGTGGAAGCAGGAGCTCGAGGGTGTGTGCTGCTTCAAATGCACCCGCACCACTCGCTGGGGTCATATTTGAACCATTTCAAGAGCTCAAGAAGGATTATCTTGCTGTTCCGATTGCACACAATGTTTCCTTGGCTCGTCAGAACTATGCAGATGACTCTGAATCTGCAATCAACGAGCAGATCAATGTGGAATACAACGTTTCCTATGTGTACCACGCCTTGTTTGCGTACTTCGACAGAGACAACATAGCTCTCAAAGGACTTGCAAAGTTCTTCAAGGAATCAAGTGAAGAAGAAAGAGAGCATGCCGAGCAGCTTATAAAGTATCAGAACATTCGTGGTGGACGAGTGGTGCTGCACCCAATCACAAGTCCTCCCTCGGAATTTGAGCATTCGGAAAAAGGGGATGCCTTGTATGCCATGGAACTAGCTTTGTCTTTGGAGAAGTTGACGAATGAGAAACTTCTGCACGTTCACAGTGTGGCAGAACGTAACAATGATCCTCAATTGGCAGACTTCATTGAGAGCGAGTTCTTGTATGAGCAGGTTAAATCGATTAAAAAGATTGCAGAGTATGTGGCTCAACTGAGATTAGTTGGAAAGGGTCATGGTGTGTGGCACTTTGATCAAAAGCTTCTTCACGATGAAGATCATGTATAA 774 0.447 MALSCSKVLSFYLSPVVGGGDVPKKLTFSSFLGLSKGVGGSRSSRVCAASNAPAPLAGVIFEPFQELKKDYLAVPIAHNVSLARQNYADDSESAINEQINVEYNVSYVYHALFAYFDRDNIALKGLAKFFKESSEEEREHAEQLIKYQNIRGGRVVLHPITSPPSEFEHSEKGDALYAMELALSLEKLTNEKLLHVHSVAERNNDPQLADFIESEFLYEQVKSIKKIAEYVAQLRLVGKGHGVWHFDQKLLHDEDHV* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1055 257 Pfam Ferritin-like domain 93 236 IPR008331 GO:0008199
Gso1g1055 257 Gene3D - 54 255 IPR012347 -
Gso1g1055 257 SUPERFAMILY Ferritin-like 76 252 IPR009078 -
Gso1g1055 257 ProSiteProfiles Ferritin-like diiron domain profile. 85 238 IPR009040 -
Gso1g1055 257 PANTHER FERRITIN 1 256 IPR001519 GO:0006826|GO:0006879|GO:0008199
Gso1g1055 257 ProSitePatterns Ferritin iron-binding regions signature 2. 205 225 IPR014034 -
Gso1g1055 257 CDD Euk_Ferritin 89 248 - -
Gso1g1055 257 PANTHER FERRITIN-2, CHLOROPLASTIC 1 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1055 Gso-Chr1 43446946 43450447 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1055 K00522 - gmx:547988 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1660 18 48564074 48567061 Gso1g1055 1 43446946 43450447 PCT
Gso7g1317 7 19153133 19156076 Gso1g1055 1 43446946 43450447 PCT
Gso1g1055 1 43446946 43450447 Gso18g1660 18 48564074 48567061 PCT
Gso1g1055 1 43446946 43450447 Gso7g1317 7 19153133 19156076 PCT