Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1660 ATGGCTCTTGCTCCATCCAAAGTTTCCACCTTTTCTGGTTTTTCTCCCAAACCCAGTGTTGGGGGTGCTCAGAAAAACCCAACTTGCTCTGTTTCTCTGAGCTTTTTGAATGAGAAACTTGGAAGCAGAAACCTTAGGGTTTGTGCTTCAACGGTGCCTCTCACTGGGGTGATTTTTGAACCGTTTGAGGAGGTTAAGAAGAGCGAGCTTGCTGTTCCAACTGCTCCCCAAGTCTCGTTGGCTCGTCAGAACTACGCTGATGAGTGTGAATCTGCGATTAACGAGCAGATAAATGTGGAATACAATGCTTCCTACGTGTACCACTCCTTGTTTGCATACTTTGACAGGGACAACGTGGCTCTCAAGGGATTTGCCAAGTTCTTCAAGGAATCTAGTGAGGAAGAAAGAGAGCACGCTGAAAAGCTCATGAAATATCAGAACACTCGCGGTGGAAGAGTTGTACTTCACCCCATCAAGAATGCCCCCTCAGAATTTGAGCATGTGGAAAAGGGGGATGCATTGTATGCAATGGAATTAGCTTTGTCTTTGGAGAAGTTAGTGAATGAGAAACTTCTGAATGTGCACAGTGTGGCAGATCGCAACAATGACCCTCAAATGGCCGACTTCATTGAAAGCGAGTTTTTGTCTGAACAGGTTGAATCAATTAAGAAAATTTCAGAGTATGTGGCTCAGTTGAGAAGGGTTGGAAAGGGCCACGGTGTTTGGCACTTTGATCAAAGACTTCTTGATTAG 753 0.4502 MALAPSKVSTFSGFSPKPSVGGAQKNPTCSVSLSFLNEKLGSRNLRVCASTVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNAPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLLD* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1660 250 ProSitePatterns Ferritin iron-binding regions signature 1. 134 152 IPR014034 -
Gso18g1660 250 Pfam Ferritin-like domain 91 235 IPR008331 GO:0008199
Gso18g1660 250 SUPERFAMILY Ferritin-like 73 249 IPR009078 -
Gso18g1660 250 ProSitePatterns Ferritin iron-binding regions signature 2. 203 223 IPR014034 -
Gso18g1660 250 PANTHER FERRITIN 1 250 IPR001519 GO:0006826|GO:0006879|GO:0008199
Gso18g1660 250 CDD Euk_Ferritin 87 246 - -
Gso18g1660 250 Gene3D - 52 250 IPR012347 -
Gso18g1660 250 ProSiteProfiles Ferritin-like diiron domain profile. 83 236 IPR009040 -
Gso18g1660 250 PANTHER FERRITIN-1, CHLOROPLASTIC 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1660 Gso-Chr18 48564074 48567061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1660 K00522 - gmx:547824 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1660 18 48564074 48567061 Gso7g1317 7 19153133 19156076 GST
Gso18g1660 18 48564074 48567061 Gso1g1055 1 43446946 43450447 PCT
Gso1g1055 1 43446946 43450447 Gso18g1660 18 48564074 48567061 PCT