Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0932 ATGAAACCGTGCTTGCGGACAAAGCCTCTTCTTCTTCTTCTGCTCTCTCTGCTACTTCTCCACCACGCCACCTTCGTTCTCTCCGATGATTCCGACAAGAAAAACACCTTCCGCGAGCGCGAAGCCTCTGACGACTCCCTCGGATACCCCGAAATAGATGAGGATGCACTTGTGAATTCGAAGTGTCCCAAGAATTTGGAGCTCCGATGGCAAACAGAAGTTAGTTCCAGCATCTATGCAAACCCCTTGATTGCTGATATTAACAGTGATGGGAAGCTTGAGATTGTGGTTCCGTCTTTTGTTCACTACCTTGAGGTTCTAGAAGGTGCTGATGGGGACAAAATGCCAGGCTGGCCAGCATTCCACCAATCAACTGTGCATTCTAGTCCTCTTCTATATGACATTGACAAAGATGGAGTGAGAGAAATAGCTTTGGCAACCTACAATGGTGAAGTGCTGTTTTTCAGGGTTTCGGGATATATGATGTCAGATAAGCTTGAAGTCCCCCGTAGGAGGGTGCTAAAAAAATGGTTTGTGGGCTTGGATCCTGACCCAGTGGACCGTTCTCATCCAGATGTTCATGATGACCAACTTATCCAAGATGCTACTATCAAGAATTCTATGTCTCAAATGAATGGAAGTAGACATGAAGCCAGATCTTCAGCTGCCATATCAACAGAAAACCACCTTGACTCAAAAAAATTGCCTAATCCTGAGCCAGAAAAGAAAATAAATGGTAGTCAAGCAGATGAAAGTATTAAGGTGCCAAATCCTGAGCCAGAAAAGAAAATAAATGGAAGTCAAGTAGATGAGAGTATTAAGGTGCCAAATCCTGAGCCAGAAAAGAAAATAAATGGAAGTCAAGTAGACGAGAGTATTAAGGTGCCAACGATTGTGGATAATTCCTCTGTGAATGCTGGGTCTCTGGAAACTGTTCATGCAGATAATAAAACCAGCACTGGGAGACGTCTTCTGGAAGATAACAACTCCAAAGGAGCAGAGCAAGGTGGTTCTGAATCCAAAGATAAAGAGGGTATTCATGCTGCAACTGTGGAAAATGATGAAGGCCTGGAAGCAGATGCTGATTCATCTTTTGAGTTATTCCGTAATAGTGAAGATCTGGCTGATGAGTATAGCTATGATTATGATGATTATGTTGATGAATCAATGTGGGGTGATGAAGAATGGACTGAAGTTAAACATGAAAAATTAGAGGATTTTGTGAATGTTGACTCCCACATCTTGTGCACTCCTGTCATTGCAGATATTGACAATGATGGTGTTTCAGAAATGATTGTTGCCGTTTCTTATTTCTTTGATCATGAGTATTATGACAACCAGGAGCATCGGAAAGAACTGGGTGATATTGACATTGGGAAATATGTTGCTGGTGGTATTGTTGTTTTTAATCTGGATACAAAACAAGTTAAATGGACTGCAGAACTTGATCTGAGTACAGATACTTCAAATTTCCGAGCCTACATATATTCTTCCCCAACTGTCGTAGATTTGGATGGTGACGGGAATCTTGACATTCTTGTTGGAACTTCGTATGGCCTGTTTTATGTGTTGGATCATCATGGTAAGGTTAGACAAAAGTTTCCTCTTGAAATGGCTGAGATTCAAGGAGCTGTTGTTGCGGCTGATGTTAATGATGACGGGAAAATTGAACTAGTTACAGCTGATACACATGGAAATGTTGCTGTATGGACTCCAAAAGGAGATTTAATATGGGAAAAACATCTAAAGAGTCTTATTCCTCAGGGTCCTACTGTTGGTGATGTTGATGGAGATGGCCATACTGAACTTGTTGTGCCTACACTATCTGGGAAGATTCATGTTCTTGATGGCAGGGATGGGTCATCTATTGGGCGGTATCCATATCCAACTCATGGAAGAATAATGAATCAAGTTCTTCTAGTCGATTTAAGTAAACACAAGGAGAAAAGGAAGGGATTAACTATTGTTACCACATCATTTGATGGTTATTTGTACCTCATTGATGGACCTACTGGATGTGCTGATGTTGTTGACATTGGTGAAACTTCTTATAGCATGGTCTTGGCAGACAACGTTGATGGTGGGGATGATCTTGATCTAATTGTCACAACTATGAATGGCAATGTCTTCTGCTTCTCAACCCCGTCTCCTCATCATCCCCTAAAGGCATGGAGGTTGCCTAGTCAAGGAAGAAACAATGTTGCAAATCGTTACAATCGTGAAGGTATCTATGTTACTCATCCTTCTAGGGCATTCCACGATGAGGAAGGCAAAAGCTTTTGGGTGGAAATTGAGATTGTAGATAATTACAGATACCCATCTGGGCATCAAGGACCATACAAAGTCACTACTTCCTTGCTAGTACCTGGTAATTACCAAGGAGAGAGAACGATAAAGTTGAACAATACCTATGATCAACCTGGTAAATATCGGATTAAGCTGCCAACAGTGTCGGTAAGGACCACAGGAACAGTTTTGGTTGAGATGGTTGACAGAAATGGACTGTATTTCTCTGATGATTTCTCTCTCACATTCCATATGCACTACTATAAACTGTTGAAGTGGCTTCTTGTTCTTCCAATGCTTGGGATGTTTGGTGTGCTTGTGATCCTTCACCCACAAGGCTCAATGCCATTGCCATCTTTTTCAAGGAACATTGATTAA 2664 0.4163 MKPCLRTKPLLLLLLSLLLLHHATFVLSDDSDKKNTFREREASDDSLGYPEIDEDALVNSKCPKNLELRWQTEVSSSIYANPLIADINSDGKLEIVVPSFVHYLEVLEGADGDKMPGWPAFHQSTVHSSPLLYDIDKDGVREIALATYNGEVLFFRVSGYMMSDKLEVPRRRVLKKWFVGLDPDPVDRSHPDVHDDQLIQDATIKNSMSQMNGSRHEARSSAAISTENHLDSKKLPNPEPEKKINGSQADESIKVPNPEPEKKINGSQVDESIKVPNPEPEKKINGSQVDESIKVPTIVDNSSVNAGSLETVHADNKTSTGRRLLEDNNSKGAEQGGSESKDKEGIHAATVENDEGLEADADSSFELFRNSEDLADEYSYDYDDYVDESMWGDEEWTEVKHEKLEDFVNVDSHILCTPVIADIDNDGVSEMIVAVSYFFDHEYYDNQEHRKELGDIDIGKYVAGGIVVFNLDTKQVKWTAELDLSTDTSNFRAYIYSSPTVVDLDGDGNLDILVGTSYGLFYVLDHHGKVRQKFPLEMAEIQGAVVAADVNDDGKIELVTADTHGNVAVWTPKGDLIWEKHLKSLIPQGPTVGDVDGDGHTELVVPTLSGKIHVLDGRDGSSIGRYPYPTHGRIMNQVLLVDLSKHKEKRKGLTIVTTSFDGYLYLIDGPTGCADVVDIGETSYSMVLADNVDGGDDLDLIVTTMNGNVFCFSTPSPHHPLKAWRLPSQGRNNVANRYNREGIYVTHPSRAFHDEEGKSFWVEIEIVDNYRYPSGHQGPYKVTTSLLVPGNYQGERTIKLNNTYDQPGKYRIKLPTVSVRTTGTVLVEMVDRNGLYFSDDFSLTFHMHYYKLLKWLLVLPMLGMFGVLVILHPQGSMPLPSFSRNID* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0932 887 PANTHER PROTEIN DEFECTIVE IN EXINE FORMATION 1 12 886 - -
Gso1g0932 887 MobiDBLite consensus disorder prediction 306 344 - -
Gso1g0932 887 MobiDBLite consensus disorder prediction 232 248 - -
Gso1g0932 887 Gene3D - 325 719 IPR015943 GO:0005515
Gso1g0932 887 PANTHER - 12 886 IPR045232 -
Gso1g0932 887 MobiDBLite consensus disorder prediction 207 231 - -
Gso1g0932 887 MobiDBLite consensus disorder prediction 207 290 - -
Gso1g0932 887 Pfam FG-GAP-like repeat 549 605 IPR013517 -
Gso1g0932 887 SUPERFAMILY Integrin alpha N-terminal domain 70 636 IPR028994 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0932 Gso-Chr1 37595646 37608800 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0932 - - gmx:100500591 1761.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0932 1 37595646 37608800 Gso3g0672 3 20446600 20455933 GST