Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0880 ATGGCAAAGGATAGAACAATTGGTGTGGCTCTAGATTTCTCCAAAAGCAGCAAGAATGCTCTGAAATGGGCATTTGAGAACTTAGCCGATAAAGGTGACACCATTTATGTCATTCACATCAACCCAAACTCTCTAGACGAGTCCCGCAACAAGCTATGGGCAAAATCTGGTTCTCCTCTTATTCCTTTGGTAGAGTTCAGAGAGCCTGAGATTATGAAAAAGTATGATGTTGAAATTGATATTGAGGTTCTTGATATGCTTGACACTGCTTCAAGACAAAAAGAGATCCACATTGTTACAAAAATATATTGGGGGGATGCAAGAGAGAAGCTTTTGGATGCTATTGAAGATCTGAAGCTGGATTCGCTGGTTATGGGAAGCAGGGGCCTCAGCACAATCCAAAGGATCATATTGGGAAGTGTAAGCAACTTTGTGATGACAAATGCTCCTTGCCCTGTGACTATCGTCAAGGAACCACCTAGCAGCAGCAAGTAA 495 0.4222 MAKDRTIGVALDFSKSSKNALKWAFENLADKGDTIYVIHINPNSLDESRNKLWAKSGSPLIPLVEFREPEIMKKYDVEIDIEVLDMLDTASRQKEIHIVTKIYWGDAREKLLDAIEDLKLDSLVMGSRGLSTIQRIILGSVSNFVMTNAPCPVTIVKEPPSSSK* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0880 164 Pfam Universal stress protein family 5 157 IPR006016 -
Gso1g0880 164 CDD USP_Like 6 156 - -
Gso1g0880 164 PANTHER OS05G0453700 PROTEIN 4 161 - -
Gso1g0880 164 PANTHER IMP2'P 4 161 - -
Gso1g0880 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Gso1g0880 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Gso1g0880 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
Gso1g0880 164 Gene3D HUPs 2 164 IPR014729 -
Gso1g0880 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0880 Gso-Chr1 35778107 35779711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0880 3 156 Receptor kinase-like Gene Family AT5G35380 27.044 3.37e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0880 - - gmx:100499951 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0880 1 35778107 35779711 Gso3g0619 3 18053458 18055040 GST
Gso18g1535 18 45765062 45766650 Gso1g0880 1 35778107 35779711 PCT
Gso7g1188 7 16651182 16652840 Gso1g0880 1 35778107 35779711 PCT
Gso1g0880 1 35778107 35779711 Gso18g1535 18 45765062 45766650 PCT
Gso1g0880 1 35778107 35779711 Gso7g1188 7 16651182 16652840 PCT