Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1535 ATGGTAAAGGATAGGAACGTTGGCGTTGCATTGGACTTCTCCAAGAGCAGCAAGATTGCTCTCAAATGGGCCATCGAAAACTTGGCTGATAAAGGCCAGACCTTGTACATCATCCACGTCAACCCTAATTCTTCTGATGATCGTAACCAGTTGTGGGTCAAATCTGGTTCTCCTCTTGTTCCTTTGACAGAGTTCAGAGATGCAGAGGTTACGAAGCACTATGGCGTGCAAACTGATGCAGAGGTTCTTGATTTGCTTGACACTGCTGCCAGGCAAAAAGAGGTCAACGTTGTGGTGAAATTGTACTGGGGTGATGTAAGAGAGAAACTTCTAGATTCCATTGAAGATCTGAAGCTAAACTCTTTGGTCTTGGGAAGCAGAGGTCTTGGAACAATTCAAAGGATGATATTGGGAAGTGTTAGCAACTTCGTGATGACTCATGCTCCATGCCCAGTGACCATTGTCAAGGAGTAG 474 0.4515 MVKDRNVGVALDFSKSSKIALKWAIENLADKGQTLYIIHVNPNSSDDRNQLWVKSGSPLVPLTEFRDAEVTKHYGVQTDAEVLDLLDTAARQKEVNVVVKLYWGDVREKLLDSIEDLKLNSLVLGSRGLGTIQRMILGSVSNFVMTHAPCPVTIVKE* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1535 157 PRINTS Universal stress protein signature 4 22 IPR006015 -
Gso18g1535 157 PRINTS Universal stress protein signature 116 128 IPR006015 -
Gso18g1535 157 PRINTS Universal stress protein signature 134 156 IPR006015 -
Gso18g1535 157 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 156 - -
Gso18g1535 157 CDD USP_Like 6 155 - -
Gso18g1535 157 PANTHER IMP2'P 4 157 - -
Gso18g1535 157 PANTHER OS05G0453700 PROTEIN 4 157 - -
Gso18g1535 157 Gene3D HUPs 1 157 IPR014729 -
Gso18g1535 157 Pfam Universal stress protein family 5 156 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1535 Gso-Chr18 45765062 45766650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1535 3 155 Receptor kinase-like Gene Family AT5G35380 29.560 6.26e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1535 - - gmx:100527197 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1535 18 45765062 45766650 Gso7g1188 7 16651182 16652840 GST
Gso18g1535 18 45765062 45766650 Gso1g0880 1 35778107 35779711 PCT
Gso18g1535 18 45765062 45766650 Gso3g0619 3 18053458 18055040 PCT
Gso1g0880 1 35778107 35779711 Gso18g1535 18 45765062 45766650 PCT
Gso3g0619 3 18053458 18055040 Gso18g1535 18 45765062 45766650 PCT