Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0349 ATGGAGTTTTTCACGAAAACGAGCGTGGTGAAGCTGAGGAGCCACCTGGACAAGTACCTCGTGGCGGATGCCGACGGCGCGCGGGTCCGCCAGAGCCGGAGGAGCTCCGGCAGGGGGACGTGGTGGACGGTGGAGGAAGTGGCGGCGGAAGGAGGGATTAATAATAAGGTTCGCCTGAGGAGCTGCCACGGGAGGCTCTTAACGGCGACAGAGACGCCGTTTCTGCTAGGCATGACGGGGAAGACGGTGCTGCAAACGGAGTTCGAGGCCGGCGCGGATTTCAAGCACGAGTGGGAAGTGATACGCGACGGATTTCAGGTGAGGTTGCGGAGCTGGAGCGGGAAGTTTCTGAGGGCCAACGGAGGGACGCCGCCGTGGCGCAACACCGTGACAGTGGACGAACCGCACAGCTCGGCGACGAGGGATTGGGTTCTGTGGGACGTGGAGCCTGTGGAGGCCATGGAGGAGCTGGTGGATGAGTTTTTGTGTGAGAACGACGACGTCGTTTCTTCTTTTGCTTCGGATGATGTATTATCGGTGGATTCGGAGCCGGCGTCGCCGATGTCGGTTTTCTCGCTCCGGTCGCCGCCGGTTAGACGGAACTCCAAGCTGCTGCTGATGCAGACAATAAGTTCGAACAAGTTCAGGAGCGGCATGGATTTCTTCCACCGCGCGAAGGCGGTGCGCCTCCGCAGCCACCACGACAAGTACCTCCTCGCGGAGGAGGACGAGGAGTCGGTGACGCAGGACCGCAACGGCTCCTCCAAAAGCGCACGGTGGACGGTAGAATACGTGGCCGAATACGACAACATAATTCGCCTGAAGAGCTGTTACGGCAAGTACCTCACCGCTTCCAACCACCTCTTCCTCTTGGGCATGACGGGCCACAAGGTTCTCCAGACGCTTCCCTCGAGGCTGGACTCTTCTGTCGAGTGGGAACCCGTCAAGGACGGAGGGCGCGTGAAGCTCAAGTCCCGTTACGGGAATTTCCTCAGGGCAAATGGCGGGTTGCCGCCGTGGAGAAACTCCGTTACTCATGATATTCCGCACAGGACCGCCACGCAGGATTGGATCCTGTGGGACGTGGATGTTGTTGAGATTTACGTGAACTCTCCCGCGAATCATGATAGACCCTCCGCTCCGCCGTTGCCGGTTGAGGACTCTGTTCCCATACTAGCGAGCGCGCCGCCGCCGCCACCGCCAACTGTGTCTGCTAGCTTTTCAAGGCAACAGCCCAATGATTTATCACCGAAGGTGGAAGGGAGAACTATATACTACCATATTGCTGAAGACAATGGAGAGGTGCTGGATGAAGGTGTGCAGGGGTATTCTTTGATTTTCAAAGGGAATGGAGTTGAAGAATTGACTCGAAAGTTCGAGGAAGAGACAGGGCTAGAGGGAATCATTGTGTGTAATCGGAGTCCTTTGAATGGAAAGCTTTATCCTCTTCGCTTGCAGCTTCCTCCAAACACTGTCACCATGCGGGTTGTTTTGGTTCTTCCCATGTCAAATTTGGCAAGAGACTTTGAGGCACAAGGCTTACTGTGA 1548 0.5678 MEFFTKTSVVKLRSHLDKYLVADADGARVRQSRRSSGRGTWWTVEEVAAEGGINNKVRLRSCHGRLLTATETPFLLGMTGKTVLQTEFEAGADFKHEWEVIRDGFQVRLRSWSGKFLRANGGTPPWRNTVTVDEPHSSATRDWVLWDVEPVEAMEELVDEFLCENDDVVSSFASDDVLSVDSEPASPMSVFSLRSPPVRRNSKLLLMQTISSNKFRSGMDFFHRAKAVRLRSHHDKYLLAEEDEESVTQDRNGSSKSARWTVEYVAEYDNIIRLKSCYGKYLTASNHLFLLGMTGHKVLQTLPSRLDSSVEWEPVKDGGRVKLKSRYGNFLRANGGLPPWRNSVTHDIPHRTATQDWILWDVDVVEIYVNSPANHDRPSAPPLPVEDSVPILASAPPPPPPTVSASFSRQQPNDLSPKVEGRTIYYHIAEDNGEVLDEGVQGYSLIFKGNGVEELTRKFEEETGLEGIIVCNRSPLNGKLYPLRLQLPPNTVTMRVVLVLPMSNLARDFEAQGLL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0349 515 SUPERFAMILY Actin-crosslinking proteins 8 150 IPR008999 -
Gso1g0349 515 SUPERFAMILY Actin-crosslinking proteins 223 365 IPR008999 -
Gso1g0349 515 Pfam Domain of unknown function (DUF569) 219 360 IPR007679 -
Gso1g0349 515 Pfam Domain of unknown function (DUF569) 1 146 IPR007679 -
Gso1g0349 515 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 212 500 - -
Gso1g0349 515 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 1 201 - -
Gso1g0349 515 Gene3D - 5 149 - -
Gso1g0349 515 Gene3D - 227 346 - -
Gso1g0349 515 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 212 500 - -
Gso1g0349 515 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 201 - -
Gso1g0349 515 MobiDBLite consensus disorder prediction 373 416 - -
Gso1g0349 515 MobiDBLite consensus disorder prediction 377 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0349 Gso-Chr1 4372536 4381519 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0349 - - gmx:100811752 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0349 1 4372536 4381519 Gso2g0204 2 2128615 2136639 GST
Gso1g0349 1 4372536 4381519 Gso18g1035 18 17233814 17236986 PCT
Gso18g1035 18 17233814 17236986 Gso1g0349 1 4372536 4381519 PCT