Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1035 ATGCAGACAACAACAAGTTCCAACACCGCCGCCACCACGTTCCGTTCCGGCATGGAGCTCTTCCACCGCGCGAAGGCGGTGCGCCTCCGCAGCCACCACGACAAATACCTCCTGGCCGACGAGGACGAGGAGTCCGTCACGCAGGACCGCAACGGATCCTCCCGCAACGCCAAGTGGACGGTGGAGCTCATTCCGGAGTTCGACAACATCATCAGACTCAAGAGCTGTTACGGAAAATACCTGACGGCGTCCAACCAGCCGCTGCTCCTCGGCGTCACGGGCCGCAAGGTGGTGCAGAGCGTGCCTCGGCGGCTCGACTCCTCCGTCGAGTGGGAGCCCGTTCGCGACGGCGCGCAGGTCAAGCTCAAGACCCGTTACGGGAACTTTCTCAGAGCCAACGGGGGGGTTCCACCTTGGAGGAACTCCGTGACGCACGATATCCCGCATAGGACCACTACACAGGATTGGATCCTCTGGGATGTGGATGTTCTCGAGATTCATGTGGTGTCCCCTGCTCCGCCTCCGATTCCGCATTCCGATTCGCTTGATTTTGAGTCCAATACTCCTTCTGCTGTTAACATCAAATCTACCACCTTCTCCAGACAAGAGTCGACAGATTCGAATGTGAGTTCGCCGCCAAAGGTGGAGGGGAGGACTATATACTACCATGTTGCAGAAGATAATGGGGATGTGGATGATGAGAATGTGCAGGGTTATTCTTTGAATTTCAAAGGGAATGGGGTTGAGCAGTTGGCTCGGAAGTTTGAGGAAGAAACGGGACTTGAGGGAGTTATTGTGTGCACTCGAAGTCCTTTGAATGGAAAACTCTACCCTCTTCGCTTGCAGCTTCCTCCAAACAATGTCACCATGCAGGTTGTTTTGGTTCTTTCCTCGTCTAAAGTGGCAAGAGAATTTGAGGAGCAAGGTATACTATGA 936 0.5459 MQTTTSSNTAATTFRSGMELFHRAKAVRLRSHHDKYLLADEDEESVTQDRNGSSRNAKWTVELIPEFDNIIRLKSCYGKYLTASNQPLLLGVTGRKVVQSVPRRLDSSVEWEPVRDGAQVKLKTRYGNFLRANGGVPPWRNSVTHDIPHRTTTQDWILWDVDVLEIHVVSPAPPPIPHSDSLDFESNTPSAVNIKSTTFSRQESTDSNVSSPPKVEGRTIYYHVAEDNGDVDDENVQGYSLNFKGNGVEQLARKFEEETGLEGVIVCTRSPLNGKLYPLRLQLPPNNVTMQVVLVLSSSKVAREFEEQGIL* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1035 311 SUPERFAMILY Actin-crosslinking proteins 22 162 IPR008999 -
Gso18g1035 311 PANTHER ACTIN CROSS-LINKING PROTEIN 12 308 - -
Gso18g1035 311 Pfam Domain of unknown function (DUF569) 18 159 IPR007679 -
Gso18g1035 311 Gene3D - 26 146 - -
Gso18g1035 311 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 12 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1035 Gso-Chr18 17233814 17236986 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1035 - - gmx:100810206 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0349 1 4372536 4381519 Gso18g1035 18 17233814 17236986 PCT
Gso2g0204 2 2128615 2136639 Gso18g1035 18 17233814 17236986 PCT
Gso18g1035 18 17233814 17236986 Gso1g0349 1 4372536 4381519 PCT
Gso18g1035 18 17233814 17236986 Gso2g0204 2 2128615 2136639 PCT