Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2175 ATGGCTAACCCACCCCCAGTTCGTCCATGGTTCCGCTTAGCCTCTATTCGCTCTACCCCTGCCCCTGCCCCTGCCCCTGCCCAAGAGTCTCGCACTACTTTGGGTCTGCCCGCATTTAGAACCGCTTCAGCACCATCATCACCACAGACTCAGCCAACTCAGGTTCAAGAACATTCTCAACCTAACAGATTCTCTTCTTCTTCTTCTTCTTCACTCCCAACTTCACTTGTCCACAATGCCACACTTTCAACATCTCCCCCAGAGAAGCACACCCGTGTGCCCGTGTCAAGTCCCACTCACTCTCCAAAAATAATAAAACAATCTGACCCTAGCCCAATGCACTCACCAAACAATAACAGAACCACCGCATCTCCACCCTCTCCCCTCACCCTCCCACCTTCCCAGTTGATGGCCGAGCCCAATATACCCCAACAGCCCGATCCCAAGACCGTGCTAGTCCAGAAAACCATTGACAGGCCCAAGCCCTGGCTCACTGGCGCCACTGGATCCCATAAAAACCACGGAAAACACGTCACCGTCAAAGAGAGTGAATCCAAGGAGAAGGGTATTCACAGAAAGCTTTCGCAGTCTGAGGAGTCTGGTATGAGAGTCATAACCATTGCAGGGGAAAACAGAGGAGCGTACATGGAACTCATCCAGTCCCCGAAGAAACACGATCCAAAGTATCTTCACAAGAAAGGAAATTCCAACATCAACGTGGACGGGGTTGAATCCGCTGAAGAAGGGAATGTGAACAAGAATCAGAAAGGTAGAACTTCTTCTTCGTTTCCCATGGCTGCGTACATGAACAGCAATGTGCAGTGTGTGAACAACTCGCTGCTGTACCACACTTCTTGCTCCCATCACAACCCCGGTGTGCGCCTCTCTCTTTCCAAGAAACCATTCGGGGAAGGTTTCCATCTCAAGGAACACGCTGATGGTCACAACACTTGA 954 0.5094 MANPPPVRPWFRLASIRSTPAPAPAPAQESRTTLGLPAFRTASAPSSPQTQPTQVQEHSQPNRFSSSSSSSLPTSLVHNATLSTSPPEKHTRVPVSSPTHSPKIIKQSDPSPMHSPNNNRTTASPPSPLTLPPSQLMAEPNIPQQPDPKTVLVQKTIDRPKPWLTGATGSHKNHGKHVTVKESESKEKGIHRKLSQSEESGMRVITIAGENRGAYMELIQSPKKHDPKYLHKKGNSNINVDGVESAEEGNVNKNQKGRTSSSFPMAAYMNSNVQCVNNSLLYHTSCSHHNPGVRLSLSKKPFGEGFHLKEHADGHNT* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2175 317 MobiDBLite consensus disorder prediction 175 197 - -
Gso19g2175 317 PANTHER OS01G0106600 PROTEIN 2 316 - -
Gso19g2175 317 MobiDBLite consensus disorder prediction 34 125 - -
Gso19g2175 317 PANTHER EXTENSIN-RELATED 2 316 - -
Gso19g2175 317 MobiDBLite consensus disorder prediction 163 197 - -
Gso19g2175 317 MobiDBLite consensus disorder prediction 18 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2175 Gso-Chr19 50204543 50205496 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2175 - - gmx:102670397 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2175 19 50204543 50205496 Gso3g2214 3 47292979 47293866 GST
Gso19g2175 19 50204543 50205496 Gso7g0469 7 4655843 4656586 PCT
Gso19g2175 19 50204543 50205496 Gso16g0174 16 2011409 2012062 PCT
Gso7g0469 7 4655843 4656586 Gso19g2175 19 50204543 50205496 PCT
Gso16g0174 16 2011409 2012062 Gso19g2175 19 50204543 50205496 PCT