Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0174 ATGACTAACCCAATTCCAATTCGTCCATGGTCTCGCTTGGCCTCTCTAAGATCAGTTCCTGCTCCAGAGTCACATCCTAAACCTCACACTGCAGAACTTTCTCTTAAAGCAACAAACACCTTTTCTAATGACAACAATGAAAGTGCCACAAAATCTCTTCCAATAACACCAGATCTTCACAGCCCAATTGAACAAAAGCTCAAACTCACTACCCCCATCACCTTTCCAACTGCCAAATTGAAGGCTCAGCCTCAAATTGAAGGGAACATTGAAAAGCCTGATGGAAATGGCAATGGCATTGGCCAAAAAAATGAAAAAGAGGTTATGATGACAACCAAAGAAAACGAATTAATGAAAGAGAAAGGTATTCACACCAAGCTTTCGGGTTCTGGGGGTCAATATGGCATAAGGGTCATAACAATTTCAGGGGAAAATAAAGGTGCATGCATTCAAATAACCAAATCCCACAAGAAACCCTTTCACAAAATGAGATCCCTGTATGCTAACAGCAATGTGCAGTGTGTCAACAACTCAATGGTGTTCCACACTAGTTTAACACACCATGATCCAGGAGTGCACCTTATTATCCCAAAAAAACAATTTGGCGAGGGATTAATCCATCTCAAGGAACGTGATAGTGGTCAGCGCAATTGA 654 0.4144 MTNPIPIRPWSRLASLRSVPAPESHPKPHTAELSLKATNTFSNDNNESATKSLPITPDLHSPIEQKLKLTTPITFPTAKLKAQPQIEGNIEKPDGNGNGIGQKNEKEVMMTTKENELMKEKGIHTKLSGSGGQYGIRVITISGENKGACIQITKSHKKPFHKMRSLYANSNVQCVNNSMVFHTSLTHHDPGVHLIIPKKQFGEGLIHLKERDSGQRN* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0174 217 PANTHER OS01G0106600 PROTEIN 163 216 - -
Gso16g0174 217 PANTHER OS01G0106600 PROTEIN 2 161 - -
Gso16g0174 217 PANTHER EXTENSIN-RELATED 2 161 - -
Gso16g0174 217 PANTHER EXTENSIN-RELATED 163 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0174 Gso-Chr16 2011409 2012062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0174 - - gmx:102661397 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0469 7 4655843 4656586 Gso16g0174 16 2011409 2012062 GST
Gso19g2175 19 50204543 50205496 Gso16g0174 16 2011409 2012062 PCT
Gso3g2214 3 47292979 47293866 Gso16g0174 16 2011409 2012062 PCT
Gso16g0174 16 2011409 2012062 Gso19g2175 19 50204543 50205496 PCT
Gso16g0174 16 2011409 2012062 Gso3g2214 3 47292979 47293866 PCT