Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2137 ATGGTGAAGGAAACCAAGTCTGATTTGAATCCATTGTTCGCGCAGAAGCACAGCCATCATCATGTTCATGTGTTCCTTAAGTTGGCAGTGTCGTGTCTCTTGGTGGGTCTCGCCATTCGCCTCCTCTTCTTCACCGATTCATTCAGCTTGTCATCTGCGGTGCATAATCCTCCTCCTCTTGCAGCTAACGCAATAGTACAGTTACCCATTCTTTCTTTTCCCTCTCCGCCCCCTCCTTCTCCTTCTCTTCATTTTCCGCCAAACCAGACCCAAACCTCTCCCCGAGATGCAGAGAAGTGTGATCTTTTTGTGGGAGATTGGGTGCCGGACCCAAATGGTCCAATGTACACTAATGAGAGCTGCCGTGTGATTGAAGATCATCAAAACTGCATGAGGAATGGACGTCCTGATTCGGGGTACCTTTATTGGAGGTGGAACCCAAGGGGTTGTCAATTACCCAAGTTCAGTCCAAAGAAATTCCTTGACATGATGAGGGATAAATCATGGGCCTTTATTGGTGATTCCATCTCTCGCAACCATGTGCAATCTTTACTTTGCATTCTTTCCCAGGTGGAAGCAGCTGATGAGGTGTACCATGATGAGGAATATAGATCAAAGATATGGAAGTTCCCTTCCCACAACTTCACACTCTCAGTGATATGGGCTCCTTTCCTTATCAAAGCAGATATCTTTGAGGACATGAATGGAGTTTCCTCTTCAGAAATACAGCTTTATCTGGACACTCTGGACGACAAATGGACCAACCAATACAAGAATTTTGACTATGTTGTAATCGCAGGTGGCAAATGGTTTCTCAAGACAGCAATATACCATGAAAACAACACTTTAACAGGCTGCCACAACTGCCATGGAAAGAATTTAACCGAGGTGGGATTCGAACACGCGTACCGCAAAGCATTGCAGCAGGTTTTTGACTTCATGACACACTCAGAACACAAAGCGGTTGTCTTCTTCAGAACCACCACACCAGACCACTTTGAGAATGGGGAATGGTTCAGCGGAGGGTACTGCAATAGGACAGTGCCCTTCAAAGAGGACCAGGTAGAAGTGAGTTATGTTGATTCCATCATCAGAGGCATTGAACTTGAAGAGTTTCACAAGACTAAGAATTCAAGTGCCAACAACTTGAAACTTTTGGACACAACTGGGCTCTCACTGTTGAGGCCCGATGGGCATCCAGGTCCATATCGCCAGTTCCATCCAAAGCCCAATGCGAAGAAGGTCCAGAATGATTGCCTGCACTGGTGTCTGCCAGGCCCAATTGATTCCTGGAACGACATAGTTTTGCAAATGCTGACAATGTGA 1326 0.4615 MVKETKSDLNPLFAQKHSHHHVHVFLKLAVSCLLVGLAIRLLFFTDSFSLSSAVHNPPPLAANAIVQLPILSFPSPPPPSPSLHFPPNQTQTSPRDAEKCDLFVGDWVPDPNGPMYTNESCRVIEDHQNCMRNGRPDSGYLYWRWNPRGCQLPKFSPKKFLDMMRDKSWAFIGDSISRNHVQSLLCILSQVEAADEVYHDEEYRSKIWKFPSHNFTLSVIWAPFLIKADIFEDMNGVSSSEIQLYLDTLDDKWTNQYKNFDYVVIAGGKWFLKTAIYHENNTLTGCHNCHGKNLTEVGFEHAYRKALQQVFDFMTHSEHKAVVFFRTTTPDHFENGEWFSGGYCNRTVPFKEDQVEVSYVDSIIRGIELEEFHKTKNSSANNLKLLDTTGLSLLRPDGHPGPYRQFHPKPNAKKVQNDCLHWCLPGPIDSWNDIVLQMLTM* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2137 441 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 61 439 - -
Gso19g2137 441 Pfam PMR5 N terminal Domain 98 151 IPR025846 -
Gso19g2137 441 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 152 438 IPR026057 GO:0016740
Gso19g2137 441 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 61 439 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2137 Gso-Chr19 49904884 49908440 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2137 - - gmx:100795653 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2137 19 49904884 49908440 Gso7g0511 7 5160600 5164155 PCT
Gso19g2137 19 49904884 49908440 Gso16g0219 16 2559165 2563095 PCT
Gso7g0511 7 5160600 5164155 Gso19g2137 19 49904884 49908440 PCT
Gso16g0219 16 2559165 2563095 Gso19g2137 19 49904884 49908440 PCT