Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0219 ATGGTGAAGAGAGTGAGGTCTGATTCGGGTCCATTGTCTCTGCAAAAGCACAACCATTGGTGTGTGAAGTTAGGAGTTTCAATCTTCTTGGTGGGTCTCGCTTTTCGTCTTCTCTTGTGGGATTCATTCAGTTTCTCATCGGTGGTGGTGGAGACACCTCCTCCTCTGGAAGATGCAAAAGCAGTGTCCCCTGTTTTCTCTTCCTCTGTTCTTCAGGATTCTGATGAGTTTCCAGAAAATGATCAGAAGATTCAGACACAAATCTCTAAGAATGAAAAATGTGATCTTTTTGTGGGAGATTGGGTGCAAGACCTATCTGGGCCAGTGTACACCAATGAGAGCTGCCGTGTGATTGAGCCTCATCAAAATTGTATGAAGAATGGACGTCCTGATTCAGAGTACCTCTACTGGAGGTGGACCCCACGAGACTGTAAATTGCCCAAATTCAATCCCAGAAAGTTTCTCAAACTCATGAGAAACAAATCATTGTCATTCATTGGTGATTCCATCTCCCGCAACCAAGTTCAGTCCCTACTTTGCGTTCTCTCAAAGGTGGAACCAGCTGTTGAGATCTACCATGACAAGGAATATAGATCAAAGATATGGAAATTTCGTTCTCACAACTTCACACTCTCAGTAATCTGGACCCCTTTCCTTGTCAAAGCAGCTATATTTGAGGACTTCAATGGAGTTACCTCTTCAGAGATACAGCTTTATCTCGACACACTCGACGAGTGGACCAAACAGTATAAGAATTTTGATTATGTTGTCATTGGTGGTGGAAAATGGTTTCTCAAGACTGCAATCTACCATGAAAACAAAACAGTCATAGGCTGCCACTACTGCCCTGGAAAGAACTTAACAGAGCTGGGATTCGACTACGCGTACCGCAAAGTACTACAAGAAGTTTTCAAGTTCTTCACAAAGTCTAACCACAAAGCCACTGTTCTCTTCAGAACCACCACACCAGACCACTTTGAGAATGGGGAGTGGTTTAGTGGAGGGTATTGCAATAGAACTGTGCCCTTCAAAGAGGGTCAGATACATATGATAGACGTAGATTCCATCATGAGAAGTATTGAACTTGAAGAGTTTGAGAAGGCTGCTTCTCTAGGATCCAAAAGGGTGAACTTGAAACTTTTGGACACAACTCTTCTTTCACTGCTGAGACCAGATGGACATCCTGGACCTTACAGGAAGTTCCAGCCATTTGCAAAAGATAAGAATGCTAAAGTTCAGAATGATTGTCTACATTGGTGTTTGCCAGGACCAATCGACTCATGGAATGACATAATCATGCAAATGCTACTCAATGCTTAA 1320 0.4295 MVKRVRSDSGPLSLQKHNHWCVKLGVSIFLVGLAFRLLLWDSFSFSSVVVETPPPLEDAKAVSPVFSSSVLQDSDEFPENDQKIQTQISKNEKCDLFVGDWVQDLSGPVYTNESCRVIEPHQNCMKNGRPDSEYLYWRWTPRDCKLPKFNPRKFLKLMRNKSLSFIGDSISRNQVQSLLCVLSKVEPAVEIYHDKEYRSKIWKFRSHNFTLSVIWTPFLVKAAIFEDFNGVTSSEIQLYLDTLDEWTKQYKNFDYVVIGGGKWFLKTAIYHENKTVIGCHYCPGKNLTELGFDYAYRKVLQEVFKFFTKSNHKATVLFRTTTPDHFENGEWFSGGYCNRTVPFKEGQIHMIDVDSIMRSIELEEFEKAASLGSKRVNLKLLDTTLLSLLRPDGHPGPYRKFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDIIMQMLLNA* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0219 439 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 59 437 - -
Gso16g0219 439 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 59 437 IPR029962 GO:0016413
Gso16g0219 439 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 146 435 IPR026057 GO:0016740
Gso16g0219 439 Pfam PMR5 N terminal Domain 92 145 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0219 Gso-Chr16 2559165 2563095 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0219 - - gmx:100794524 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0511 7 5160600 5164155 Gso16g0219 16 2559165 2563095 GST
Gso19g2137 19 49904884 49908440 Gso16g0219 16 2559165 2563095 PCT
Gso16g0219 16 2559165 2563095 Gso19g2137 19 49904884 49908440 PCT