Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1851 ATGACAAAACAAAGTTCTAGGTTGGAGGGTAAGGTGGCTCTTATCACTGGAGCAGCAAGTGGGATTGGTGAAGAGACAGTGAGATTGTTCGCTGAACATGGAGCACTTATTGTTGCAACAGATATTCAAGATGAACAAGGTCACCGAGTTGCTGCTTCAATAGGGTCAGAGAGAGTGACTTACCATCATTGTGATGTGAGAGATGAAAACCAAGTTGAAGAAACAATCAATTTCACTTTGGAAAAACATGGTCGCATAGATGTTTTGTTCAGCAACGCTGGAGTAATAGGTTCCTTATCTGGGATCCTTGACCTTGATCTGAATGAGTTTGACAACACCATGGCCACAAATGTTCGTGGTGTAGCTGCCACAATTAAGCACACGGCACGTGCCATGGTTGCTAAAAGCACCCGTGGATCCATCATATGCACCACTAGTGTGGCTGCTACTATTGGTGGAACAGGTCCTCATGGTTATACCACATCAAAACATGCTCTTCTGGGGTTGGTGAAATCAGCTTGTAGTGAACTTGGTGCTTATGGAATAAGAGTTAATAGCATATCCCCTTTCGGAGTTGCAACACCTCTTGCATGCAAAGCTTTCAACTTTGAGCCTGAGCAAGTTGAAGCTAATAGCTGCTCACAGGCTAATCTGAAGGGTGTTGTGTTGAAGGCTAGGCATATAGCTGAAGCAGCTTTGTTTCTTGCTTCTGATGATGCTGCTGTTTACATCAGTGGTCACAACTTGGTGGTGGATGGTGGGTTCTCTGTGGTTAATAGAAGTTATTCTTTCACACCAGCTTAA 804 0.4403 MTKQSSRLEGKVALITGAASGIGEETVRLFAEHGALIVATDIQDEQGHRVAASIGSERVTYHHCDVRDENQVEETINFTLEKHGRIDVLFSNAGVIGSLSGILDLDLNEFDNTMATNVRGVAATIKHTARAMVAKSTRGSIICTTSVAATIGGTGPHGYTTSKHALLGLVKSACSELGAYGIRVNSISPFGVATPLACKAFNFEPEQVEANSCSQANLKGVVLKARHIAEAALFLASDDAAVYISGHNLVVDGGFSVVNRSYSFTPA* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1851 267 Pfam Enoyl-(Acyl carrier protein) reductase 17 256 - -
Gso19g1851 267 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 6 263 - -
Gso19g1851 267 Gene3D - 1 263 - -
Gso19g1851 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 258 IPR036291 -
Gso19g1851 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Gso19g1851 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 IPR002347 -
Gso19g1851 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 IPR002347 -
Gso19g1851 267 PRINTS Glucose/ribitol dehydrogenase family signature 12 29 IPR002347 -
Gso19g1851 267 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Gso19g1851 267 PRINTS Glucose/ribitol dehydrogenase family signature 133 149 IPR002347 -
Gso19g1851 267 PRINTS Glucose/ribitol dehydrogenase family signature 159 178 IPR002347 -
Gso19g1851 267 PRINTS Glucose/ribitol dehydrogenase family signature 180 197 IPR002347 -
Gso19g1851 267 PRINTS Glucose/ribitol dehydrogenase family signature 218 238 IPR002347 -
Gso19g1851 267 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B 6 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1851 Gso-Chr19 47211249 47212841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1851 3 266 Miscellaneous Gene Families AT2G29150 32.222 3.63e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1851 - - gmx:100777244 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1851 19 47211249 47212841 Gso3g1886 3 44421828 44422900 GST