Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1802 ATGTTTCGGATAACGAGATTCTCGGGGTTTTTCTCCGCCGCAATGTTTGTGATTGTTCTTGTTATTCTCTCCCCCTCCTTCCAATCCGAAGCCATTCGATCCTCCCACCGATTTTCCTTCCGGAAAGCCCCTCCGTTCCGCAATGCCGCCGAATGCGGTTCAATTTCCGGTGAAACCACCACCGTCTGCGACCCTTCCTTGGTCCACGTCGCCATAACCCTCGACGTCGACTACCTCCGCGGCTCAATCGCCGCCGTGCACTCCATCCTCCACAACTCCCTCTGTCCGGAGAACATCTTCTTCCATTTCCTCGTCTCCGACACCAACCTCCAAACCCTAGTTGAATCCACGTTCCCTAACTTGAAGTTCAACGTCTATTACTTCGATCCGAACATCGTCGCTCACTTGATCTCCTCCTCCGTGCGGCAGGCGTTGGAGCAGCCTCTCAATTACGCGAGAAATTACCTCGTTGACCTTCTGGAGAGTTGCGTGGAGAGGGTGATCTACTTGGACTCCGATCTGGTGGTAGTGGATGACGTGGCGAAACTGTGGAGCGCGAGTCTGGACTCACGCGCCATCGGCGCGCCGGAGTACTGCCACGCGAACTTCACGAAGTATTTCACGGCGGGGTTCTGGTCGGAGCCGAGGTTGTCGGGGACGTTCGCGCAGCGGAGGGCGTGCTACTTCAACACGGGGGTGATGGTGATGGATCTGGTGAAGTGGAGGAAGGAAGGGTACACCAAGAGAATCGAGAGGTGGATGGAGATTCAGAAGAGTGATAGGATCTACGAGCTTGGTTCTCTGCCGCCGTTTTTGCTGGTGTTTGCGGGACACGTGGCGCCCATTGAGCACCGGTGGAACCAGCATGGTTTGGGCGGGGATAACGTGAAGGGTAGTTGCCGTGACTTGCACCCTGGTCCGGTTAGTTTGTTGCATTGGTCTGGTAGTGGGAAGCCATGGATCCGTTTAAGTTCCAAACGCCCCTGTCCTCTGGATTCTCTATGGGCTCCCTTTGATTTGTATGCACACTCTTCCTCTTAA 1041 0.5514 MFRITRFSGFFSAAMFVIVLVILSPSFQSEAIRSSHRFSFRKAPPFRNAAECGSISGETTTVCDPSLVHVAITLDVDYLRGSIAAVHSILHNSLCPENIFFHFLVSDTNLQTLVESTFPNLKFNVYYFDPNIVAHLISSSVRQALEQPLNYARNYLVDLLESCVERVIYLDSDLVVVDDVAKLWSASLDSRAIGAPEYCHANFTKYFTAGFWSEPRLSGTFAQRRACYFNTGVMVMDLVKWRKEGYTKRIERWMEIQKSDRIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGDNVKGSCRDLHPGPVSLLHWSGSGKPWIRLSSKRPCPLDSLWAPFDLYAHSSS* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1802 346 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 69 329 IPR029044 -
Gso19g1802 346 Pfam Glycosyl transferase family 8 69 322 IPR002495 GO:0016757
Gso19g1802 346 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 6-RELATED 6 344 - -
Gso19g1802 346 SUPERFAMILY Nucleotide-diphospho-sugar transferases 68 342 IPR029044 -
Gso19g1802 346 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 6 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1802 Gso-Chr19 46761070 46762721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1802 1 345 Glycosyltransferase AT3G62660 72.253 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1802 - - gmx:100805221 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1802 19 46761070 46762721 Gso3g1836 3 44008996 44010530 GST
Gso19g1802 19 46761070 46762721 Gso2g0132 2 1346171 1350602 PCT
Gso19g1802 19 46761070 46762721 Gso10g0138 10 1439432 1441251 PCT
Gso2g0132 2 1346171 1350602 Gso19g1802 19 46761070 46762721 PCT
Gso10g0138 10 1439432 1441251 Gso19g1802 19 46761070 46762721 PCT