Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1776 ATGACTCCTTCTTTCACTAACGTCAAAATCTTCTCTTCTCTCGTCCTAGACGGATTCTTCAACGCTCTCACCAGACGCGGGTACGCGGTGGCATCACAAAGCGCAACAAAGGAAGGAGTGGGCTTTATGAGCGGCAAGATGGCACCAAAGTCAGGGGAAGACAACAAAGGGGTGTCTACGTACAAGGTTTCGTGGGTGCCAGATCCTGTCACTGGTTACTACAAACCCGAGAACATCAACGAGATTGACCCTGCAGAATTGCGCGCGATGCTTCTCGGCAAAAAAATCGACAACTAA 297 0.4983 MTPSFTNVKIFSSLVLDGFFNALTRRGYAVASQSATKEGVGFMSGKMAPKSGEDNKGVSTYKVSWVPDPVTGYYKPENINEIDPAELRAMLLGKKIDN* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1776 98 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 95 IPR004926 -
Gso19g1776 98 Pfam Late embryogenesis abundant protein 1 92 IPR004926 -
Gso19g1776 98 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1776 Gso-Chr19 46560320 46561242 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1776 - - gmx:100306430 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1776 19 46560320 46561242 Gso3g1812 3 43810019 43810937 GST
Gso19g1776 19 46560320 46561242 Gso2g0148 2 1503321 1504962 PCT
Gso19g1776 19 46560320 46561242 Gso10g0154 10 1624498 1625914 PCT
Gso2g0148 2 1503321 1504962 Gso19g1776 19 46560320 46561242 PCT
Gso10g0154 10 1624498 1625914 Gso19g1776 19 46560320 46561242 PCT