Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0154 ATGGCTCGCTCTTTCTCCAACCTCAAGGTTCTCTCTGCTCTTGTCGCCGACGGATTCTCCAACACTCTCACCAGGCGTGGGTACGCAGTAGCGACACAAAGCGCAACAAGAGGAGGAGCAGCCTCCATCAGCGGCAAGTCAGGGGAAGACAAGGTACTAGGAGGAGGTGCTGAAAAGGTTTCGTGGGTCCCAGACCCTGTCACTGGTTACTACAAACCGGAGAACATCAAAGAGATTGATGTTGCTGAGCTGAGAGCCACGGTTTTGGGCAAAAAATTCAACCACTAG 288 0.5278 MARSFSNLKVLSALVADGFSNTLTRRGYAVATQSATRGGAASISGKSGEDKVLGGGAEKVSWVPDPVTGYYKPENIKEIDVAELRATVLGKKFNH* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0154 95 Pfam Late embryogenesis abundant protein 1 89 IPR004926 -
Gso10g0154 95 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 93 IPR004926 -
Gso10g0154 95 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0154 Gso-Chr10 1624498 1625914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0154 - - gmx:100306369 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0148 2 1503321 1504962 Gso10g0154 10 1624498 1625914 GST
Gso19g1776 19 46560320 46561242 Gso10g0154 10 1624498 1625914 PCT
Gso3g1812 3 43810019 43810937 Gso10g0154 10 1624498 1625914 PCT
Gso10g0154 10 1624498 1625914 Gso19g1776 19 46560320 46561242 PCT
Gso10g0154 10 1624498 1625914 Gso3g1812 3 43810019 43810937 PCT