Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1731 ATGGCTGGAATGACGAACAATCAACCGTCACAGTGGTGGTGGCTTGAAAGCCACACCACCACTAATCGATCCCCATGGCTTCAATCCACTCTCTCTGAGCTAAATGAGAAGACAAGGGCAATGTTAAAGTTAATTGAAGAAGATGCAGATTCCTTTGCTAAACGTGCAGAGATGTATTACAAGAAGCGACCAGAACTTGTGAGCATGGTTGAGGATTTCTACAGGGCACACCGCTCCCTAGCTGAGCGCTATGATCAAGTCAAGCCTGATACTACTGGAATTGGACACCTCATTACTGGGGGGTCACCTTTCGCTTCAGCAAAGTATCAGTTGGAGAAGTTGATGACTTTTTCAGATAACGGATATGATACCTATTCTGAGCATTGTGATGTGTACGAGTCTGAGGAATCTGAAGTTGATGATCCTGAGCAGGAGGAGGAAGAAGAAGAGGGGACCAAGTTTCTGCATAAAAGCACAAAAAAGGAGCAAGTTTTGTTTGTGGTTGCGGGTGATGTTGAAGTGATGAAGCTGAGGGATGAAATTAAGAGACTCAATGAAGAGAACAAGGCTCAAAGGGATCAAATCAAGCAGAAGGATACCATTTGTGATGAAGTAATGATGTTGAGGGAAGAAATAGAAAGGCTTAGAGATGAGAATGAGGCACAAAAGGAACGACTCAAGCAGAAGGATGAAGAGAAGATCGAGGTGATAAGACAGCTGAGTTTAGCAATAGATGTGCTGAAGCAGGAGAATGCAAAGATGAGAAACTACATTGCTAAGGAATCCACCAAGAAATGGAAGAACCCATTTGAGATCAACAAACTTGTGGAAGCATTTTCGGTGAAGTTGTTCAGTGGCACTCCAAAGAATCAGCCCGGTGTTGAGCTCTCTAGATGTGGTTAA 903 0.4363 MAGMTNNQPSQWWWLESHTTTNRSPWLQSTLSELNEKTRAMLKLIEEDADSFAKRAEMYYKKRPELVSMVEDFYRAHRSLAERYDQVKPDTTGIGHLITGGSPFASAKYQLEKLMTFSDNGYDTYSEHCDVYESEESEVDDPEQEEEEEEGTKFLHKSTKKEQVLFVVAGDVEVMKLRDEIKRLNEENKAQRDQIKQKDTICDEVMMLREEIERLRDENEAQKERLKQKDEEKIEVIRQLSLAIDVLKQENAKMRNYIAKESTKKWKNPFEINKLVEAFSVKLFSGTPKNQPGVELSRCG* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1731 300 PANTHER PROTEIN NETWORKED 4A 10 291 - -
Gso19g1731 300 Pfam KIP1-like protein 12 85 IPR011684 GO:0003779
Gso19g1731 300 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 91 IPR011684 GO:0003779
Gso19g1731 300 MobiDBLite consensus disorder prediction 134 155 - -
Gso19g1731 300 MobiDBLite consensus disorder prediction 134 148 - -
Gso19g1731 300 Coils Coil 167 239 - -
Gso19g1731 300 PANTHER PROTEIN NETWORKED 3A-RELATED 10 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1731 Gso-Chr19 46203446 46207434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1731 - - gmx:100783309 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1731 19 46203446 46207434 Gso3g1763 3 43448122 43452431 GST
Gso19g1731 19 46203446 46207434 Gso2g1266 2 15669325 15671929 PCT
Gso19g1731 19 46203446 46207434 Gso10g0188 10 1981801 1984784 PCT
Gso2g1266 2 15669325 15671929 Gso19g1731 19 46203446 46207434 PCT
Gso10g0188 10 1981801 1984784 Gso19g1731 19 46203446 46207434 PCT