Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0188 ATGATGATTTTTCGATCTTTGTTTGGGGAATTCGAGGTTATCTTTTGTTATTTTACTCAATGTTTTTTCATATATAGTAGGCTCTTGGTGTTGGTGATATCAAAGACCCAGAGGATTGCTGAAATGATGAACAATCAACCATCGCAGTGGTGGTGGCTTGAGAACCACAGCAACACTAGACGATCCCCTTGGCTTCAATCCACTCTCACTGAGCTAAATGAGAAGACCAAGGCAATGTTAAAGCTAATTGAAGAAGATGCAGATTCCTTTGCCCAACGTGCAGAGATGTATTACAAGAAGAGACCACAGCTTGTGAGCATGGTTGAAGATTTCTATAGGACACATCGTTCATTAGCCGAGCGGTATGATCAAGTCACCGGAATTCGCCAGCAGAAGACAGGAGGAGGGGGATCACCTTTTTCTCCACTCAAGCATCATCAATCAGAGAAGTTGATGAGTTATGCAGATGACAGTTATGATAGCTATTCTGAGAGTTTTGATGTAGAGGAGTCTGTGGAATCTGAAGTTGATGATCCTGAGCAAGAAGAGGAAGAGGTTACCAAATTTGATAACTGTACAGAAGAGGAGGAAGTTCAGTTTGTAGTTGCTAATGATGAAGGGATGAGGCAGAGGAAAGAAATTGAGAGACTTGGTGAAGAGAACAAGGATCACAAAGATCAAATTAAGGAGAAATGTAACATTCATGAAGTTGTTATGGTGTTGAGGGAAGAAATAGAAGGACTCAGAAAAGAGACTAGAGTGCAGAAAGATGAACTCAGCCAGAAAAGCATCATTTGCAGTGAAGTAATGATGTTGAGGGAAGAAAAAGAACGACTCAGAGAAGAGAATAGAGAGCAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGTAATGATGTTGTGGGAAGAAATTGAAGTACTTAGAGAAGAGAATAGAGTGAAGAATGATGAACTCAACCAGAAAGGTACCGTTTGTGGTGAAATAATGATGTTGAGGGAAGAAATTGAAGGACTCAGAAAAGAGAATAGCGTGCAGAATGATGAACTCAACCAGAAAGGTACCATTTGTGGTGAAGTAATGATGTTGAAGGAAGAAATAGAACGTCTCAGAAAAGAGAATAAAGTGCAGAAGGATGAACTCAACCAGATTTGCGGTGAAGTAATGATATTGAGGGAAGAAATAGAAAGACTCAGAAAAGATGAAAGAGTGCAGAATGATGAACTCAAGAAAAAAGGTACCATTTGTGGTCAAGTATTGATGTTAAGGGAAGAGATAGAAAGAGTCAGCGAAGAGAATATGGTACAGAAGGACCATCTCAAGCAAAAAGACCAAGAGAAAATAGAGGTGATTAGACACCTGAGTTTAGCTATAGATGTGCTGAAGCAGGAGAATGTAAAGATGAGAAGCTTCATTGCTAAAGAATTCACCAACAAATGGAAGAATCCATTTGAGTTTAAAAAACTCATGGGATCTTTATCGGTGAAGTTGTTTAATGGAAGGAATCAACCTAGTATTGTAGCTCTCTAG 1536 0.3932 MMIFRSLFGEFEVIFCYFTQCFFIYSRLLVLVISKTQRIAEMMNNQPSQWWWLENHSNTRRSPWLQSTLTELNEKTKAMLKLIEEDADSFAQRAEMYYKKRPQLVSMVEDFYRTHRSLAERYDQVTGIRQQKTGGGGSPFSPLKHHQSEKLMSYADDSYDSYSESFDVEESVESEVDDPEQEEEEVTKFDNCTEEEEVQFVVANDEGMRQRKEIERLGEENKDHKDQIKEKCNIHEVVMVLREEIEGLRKETRVQKDELSQKSIICSEVMMLREEKERLREENREQKDELNQKDIICGEVMMLWEEIEVLREENRVKNDELNQKGTVCGEIMMLREEIEGLRKENSVQNDELNQKGTICGEVMMLKEEIERLRKENKVQKDELNQICGEVMILREEIERLRKDERVQNDELKKKGTICGQVLMLREEIERVSEENMVQKDHLKQKDQEKIEVIRHLSLAIDVLKQENVKMRSFIAKEFTNKWKNPFEFKKLMGSLSVKLFNGRNQPSIVAL* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0188 511 Pfam KIP1-like protein 50 123 IPR011684 GO:0003779
Gso10g0188 511 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 48 129 IPR011684 GO:0003779
Gso10g0188 511 PANTHER PROTEIN NETWORKED 4A 48 315 - -
Gso10g0188 511 PANTHER PROTEIN NETWORKED 4A 393 511 - -
Gso10g0188 511 Gene3D - 322 405 - -
Gso10g0188 511 Coils Coil 238 262 - -
Gso10g0188 511 Coils Coil 331 351 - -
Gso10g0188 511 Coils Coil 269 296 - -
Gso10g0188 511 PANTHER PROTEIN NETWORKED 3A-RELATED 48 315 - -
Gso10g0188 511 PANTHER PROTEIN NETWORKED 3A-RELATED 393 511 - -
Gso10g0188 511 MobiDBLite consensus disorder prediction 163 185 - -
Gso10g0188 511 Coils Coil 362 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0188 Gso-Chr10 1981801 1984784 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0188 - - gsj:114372579 944.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1266 2 15669325 15671929 Gso10g0188 10 1981801 1984784 GST
Gso19g1731 19 46203446 46207434 Gso10g0188 10 1981801 1984784 PCT
Gso3g1763 3 43448122 43452431 Gso10g0188 10 1981801 1984784 PCT
Gso10g0188 10 1981801 1984784 Gso19g1731 19 46203446 46207434 PCT
Gso10g0188 10 1981801 1984784 Gso3g1763 3 43448122 43452431 PCT