Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1719 ATGAAGAAAAATGGCGTTATTCCGTGGTGGATGAAGCAGCAATGGCGGGGAATAGTGAAAGTGCGTCTGAAATGGGTGAAGAACCGAAGCCTGGACCACGTGATCGACAAGGAAACCGATCTGAAGGCGGCGTGCCTCCTGAAGGACGCCGTGAACCGCTCCTCCACCGGCTTCCTCACCGCGCAATCCGTCGCCGACTGGCAGAAACTCCTCGGCCTCACCGTCCCCGTCCTCCGCTTTCTCCGCCGCTATCCCACTCTCTTCCAGGAGTTCCCCCACCCTCGCTGGGCCTCCCTCCCCTGCTTCCGCCTCACCGACACCGCACTCTTCCTCCACTCCCAGGAACTCTCCCTCCACCAAACCCACCAAAACGACGCCGTCCAAACCCTCTCCAAGCTCCTCATGATGTCCAACTCACGCGCCCTCCCCCTCCACTCCCTCCACGCGCTCAAGTGGGATCTCGGTTTACCCGACACCTTCCACAAAACCCTAGTCCCCCTCTACCCCCACCAGTTCCAATTTGTCAGGTCCCCCAACGGCGTCGTTTCAATCCAGCTATCTCGCTGGCCCGAGGAACTCGCGGTTTCCGCGCTGCAGAAGAGCAACGAGGGTGGGACCCACTACCGCGAATTCAAGCGAGGACAATCGGCTTTGGCTTTTCCGATGCGGTTTCCGAGGGGTTACGGCGCGCAGAAGAAAGTGAGGACGTGGATGGAGGAGTTTCAGAAGCTTCCTTACGTTTCTCCTTACACGGATTCCACGAAGATTGATCCTAACAGCGATTTGATGGAGAAGCGCGTCGTTGGGGTTCTGCACGAGATTTTGAGTTTGACTCTGCACAAGAAAACCAAGAGGAACTACTTGAGGGGCTTGAGGGAAGAGTTTAACCTTCCGCATAAGTTTACCCGAATTTTCACCAGGTATCCCGGGATTTTTTACCTCTCCTTGAAGTGTAAAACCACCACGGTTACTCTCAAGGAAGGGTACCAGAGTGGGAAGCTAGTGGACCCGCACCCTCTTGCTCGGCATAGAGATAAGTTTTACCATGTGATGCAGACGGGGCTTCTATATCGCGGCGATGGATCGTTGAAACCTCAGGAGAACAATTTGCTGGCTGAGAATGATAAATTAAGGAGTGAAGACTCTGAGGTTGAAATGAGTGATGAACTCTGCGAGACTGAGTTAAGTGAATGA 1194 0.5461 MKKNGVIPWWMKQQWRGIVKVRLKWVKNRSLDHVIDKETDLKAACLLKDAVNRSSTGFLTAQSVADWQKLLGLTVPVLRFLRRYPTLFQEFPHPRWASLPCFRLTDTALFLHSQELSLHQTHQNDAVQTLSKLLMMSNSRALPLHSLHALKWDLGLPDTFHKTLVPLYPHQFQFVRSPNGVVSIQLSRWPEELAVSALQKSNEGGTHYREFKRGQSALAFPMRFPRGYGAQKKVRTWMEEFQKLPYVSPYTDSTKIDPNSDLMEKRVVGVLHEILSLTLHKKTKRNYLRGLREEFNLPHKFTRIFTRYPGIFYLSLKCKTTTVTLKEGYQSGKLVDPHPLARHRDKFYHVMQTGLLYRGDGSLKPQENNLLAENDKLRSEDSEVEMSDELCETELSE* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1719 397 MobiDBLite consensus disorder prediction 373 397 - -
Gso19g1719 397 Pfam Plant organelle RNA recognition domain 26 354 IPR021099 GO:0003723
Gso19g1719 397 PANTHER OS04G0546100 PROTEIN 11 396 - -
Gso19g1719 397 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 11 396 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1719 Gso-Chr19 46071665 46073425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1719 - - gmx:100801315 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1719 19 46071665 46073425 Gso3g1749 3 43314288 43317035 GST
Gso19g1719 19 46071665 46073425 Gso10g0218 10 2267998 2270791 PCT
Gso10g0218 10 2267998 2270791 Gso19g1719 19 46071665 46073425 PCT