Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0218 ATGTTCTCCAGAAGCAAAAGCCACACCCTCTCCCACCTCAAGGCGAGATCCATATCAAGCCTGAAAGTAGTGTGGCGCAAGGACCCAGAACTCGACCGAGCCATAGAGTTGGACAAGCGATACAAGCAATGCGCCCGCGTCGTCAAAGAAGTCCTCAACGAACCAGGCCAGGTCATCCCTCTCCGCTACCTCGAAAAGCGCCGCGAAAGGATGCGCCTCAAGCTCAAAGCCGAAACCTTTCTCAACCAAAACCCCGGCCTCTTCGACGTCTACTACGACCGCATCAAACCCAAAACCGAACCGGTCCGCTTCCTCCGCCCCACCGACCGCCTCCGCCGATTCCTCCACCAGGAGCGACGCGTTTTCCTCGACAACGAGCCCTTCATCGTGTCCAAGTTGTGTAAACTGTTAATGATGTCGAAGAACAAGGTTGTCAGTGCTGACAAGCTACTTCACGTGAAGAGGGAGTTCGGCTTCCCCAACGATTTCTTGGTTGATTTGGTTCCTAGGTATCCGGAATATTTTAGGTTAACCGGTTCTCCTGGGGAGGGGAAATCGTTTCTGGAGTTGGTTAATTGGAACCCCGAGTTTGCAAAATCTGTAATTGAGCGAAGGGCTGAAGAGGAGAGTGAGCGTTTGGGGATTAGGGTTAGGCCCAGTTTCAATGTGCAGCTTCCACGAGGGTTTGTGTTGAAGAAGGAGATGAGGGAGTGGATTAGGGATTGGATGGAGCTTGATTACGTGTCCCCTTATGAGGATGTGTCTCATTTGGATCAGGCTTCTAGAGAGATGGAGAAGAGGTCCGTTGGAGTGTTCCATGAACTGCTCTCACTTTCCTTGCACAAGAGGATTCCTGTGCCGATTCTCGGAAAGTTTTGCGACGAGTATAGGTTTTCGAATGCGTTTTCCACCACTTTTACTAGGCATTCGGGGATATTCTATCTGTCTTTGAAAGGAGGGATTGAGACGGCGGTGTTGAGAGAAGCGTACAGAGGCGATGAGTTGATTGACCGCGATCCTCTGCTCCGGATAAAGGATATGTTTGTTGAGTTGTTGGAGGATGGGTGGCGGCAAAGAGCAGAGCAGTTGAGGTTGAAGCAAGAGAAGGTTAAGGAAGATATGGAGTTATTGGCTACTAAAGTTAGTGAATGA 1152 0.5043 MFSRSKSHTLSHLKARSISSLKVVWRKDPELDRAIELDKRYKQCARVVKEVLNEPGQVIPLRYLEKRRERMRLKLKAETFLNQNPGLFDVYYDRIKPKTEPVRFLRPTDRLRRFLHQERRVFLDNEPFIVSKLCKLLMMSKNKVVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLTGSPGEGKSFLELVNWNPEFAKSVIERRAEEESERLGIRVRPSFNVQLPRGFVLKKEMREWIRDWMELDYVSPYEDVSHLDQASREMEKRSVGVFHELLSLSLHKRIPVPILGKFCDEYRFSNAFSTTFTRHSGIFYLSLKGGIETAVLREAYRGDELIDRDPLLRIKDMFVELLEDGWRQRAEQLRLKQEKVKEDMELLATKVSE* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0218 383 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 9 378 IPR045040 GO:0003723
Gso10g0218 383 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 9 378 - -
Gso10g0218 383 Coils Coil 360 380 - -
Gso10g0218 383 Pfam Plant organelle RNA recognition domain 27 356 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0218 Gso-Chr10 2267998 2270791 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0218 - - gmx:100778092 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1719 19 46071665 46073425 Gso10g0218 10 2267998 2270791 PCT
Gso3g1749 3 43314288 43317035 Gso10g0218 10 2267998 2270791 PCT
Gso10g0218 10 2267998 2270791 Gso19g1719 19 46071665 46073425 PCT
Gso10g0218 10 2267998 2270791 Gso3g1749 3 43314288 43317035 PCT