Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1714 ATGGCGGTTTCCGAAGAAGAATGCTCTTCTGCGAAGTCAGGTTCATCAGGTCCCTCTTCTTCGTCTTCCTCCGCCTCGCGTTACTACCTCTCCAAGTGCGTTTTCAGAGGCAGCGTCGTTCTTCATGTCCTCCACGCTCACATCCGTTCTCCCTCCTCAAACGACGTCGTTTTCGGCAAGGAGACATCTATAGAATTGGTGGTTATTGATGAGGATGGGAATGTGCAATCTGTGTTTGATCAGCCTGTCTTTGGCACCCTCAAAGATCTTGCCATATTGCCCTGGAATGAGAAATTTCGTGCCGCGCGTGATCCGCAGCTGTGGGGTAAAGACCTTTTGGTTGCTACATCTGATTCTGGGAAGTTGTCGTTGCTTACATTTTGCAATGAAATGCATAGGTTTGTACCTGTAACACATATTCAGCTATCTAATCCTGGAAACCAAATGGATTTTCCTGGAAGAAAGCTAGCAGTTGATTCCAGTGGTTGTTTTATTGCTGCCAGTGCATATGAAGATCGGTTGGCTTTGTTTTCTTTGTCAATGTCCAGTGGTGATATCATTGATGAGAGAATTGTATATCCTTCTGAAAGTGAAGGGACTGCAAGTACTTCCAGAAGCATCCAAAGAACCAGTATAAGTGTTACTATTTGGAGCATCTGTTTCATTTCACAAGATTCCAGACAACCAAGCAAGGAGCATAATCCTGTACTAGCTCTTATTATAAATAGGAGGGAAGCGCTTCTAAATGAACTGCTATTATTGGAATGGAATGTTAAAGCACGTAAAATATTTGTTATTTCTCAGTATGTTGAAGCTGGGCCTCTAGCACATGACATTGTTGAAGTTCCCAACTCTGGGGGACTTGCATTTCTATTCAGGGCTGGTGATGTTCTCTTAATGGATCTTAGAGATCATCGCAACCCATCCTGTGTCTGTAAGACTAACTTGAACTTCTTACCCCATGCCATGGAAGAGCAGACTTATGTGGAAGACTCTTGTAAATTACACGATGTTGATGATGAACGCTTTAGTGTTGCTGCCTGTGCTTTGTTGGAGCTGAGTGATTATGATCCTATGTGCATAGACAGTGACAATGGTGGTGCTAATTCAGGTTACAAATACATATGCTCGTGGAGTTGGGAACCTGAAAATAATAGAGATCCTAAGATGATTTTCTGTGTAGATACTGGGGAATTTTTTATGATTGAAGTCCTTTTTAATTCTGAAGGCCCTAAAGTTAATCTGTCTGAGTGTCTCTATAAAGGTCTACCCTGTAAAGCACTTTTGTGGGTTGAAGGTGGATATCTTGCTGCCCTTGTGGAAATGGGGGATGGTATGGTCCTGAAATTGGAAGATGGAAGGCTGTGTTATACAAACCCTATTCAAAACATTGCACCAATCTTGGATATGGAAGTTGTAGATTATCATGATGAGAAGCATGATCAAATGTTTGCTTGCTGTGGTGTGGCACCAGAGGGCTCATTAAGGATTATTCGAAATGGTATTAATGTGGAAAATCTACATAGGACTGCTTCTATATATCAAGGGGTAAGTGGTACTTGGACTGTCCGAATGAAAGTTACGGATTCACACCATTCTTTTCTAGTTCTATCATTTCTTGACGAAACCAGAATATTGTCAGTTGGCTTAAGTTTTACTGATGTGACTGATTCAGTCGGTTTCCAACCTAATGTCTGTACTTTGGCATGCGGCCTTGTGACTGATGGTTTGCTTGTTCAGATCCACCGATCTACTGTTAAGCTTTGTTTGCCCACTAAGGCTTCTCATTCTGAAGGTATCCCTTTGTCCTCTCCTATTTGCACATCTTGGTCTCCAGACAATGTGGGTATTAGTTTGGGGGCAGTTGGGCATAATTTCATAGTTGTGTCAACCACTAACCCATGCTTTCTGTTTATCCTTGGGGTTAGATTGCTATCAGTTTATCAATATGAAATTTATGAAATGCAACATTTGGTACTGCAGAATGAATTATCGTGCATTTCCATCCCCGGACAAGAAATTGAGCAAAAACAATCAAATTCGTCCATTTCTGCTAATAATAGTAGCATCTCTTCTTTCCAAAGTGGGGTGGACATCAATAAAACCTTTGTTATTGGCACACATAAGCCTTCCGTGGAAATTTGGTTTTTTGCACCAGGTGGAGGAATTACAGTAGTTGCTTGTGGGACAATTTCATTAACAAATACAATAGGGTCTGTCAAAAGTGATTCTATACCCCAAGATGTACGGCTTGTATCTGCTGATAAGTATTATGTTCTTGCTGGATTGAGGAATGGAATGCTCCTTCGCTTCGAGTGGCCGGCAGAACCATGTCCTTCATCACCAATAAATATGGTGGATACTGCTTTATCTTCTACAAATTTGGTAAATTCTGTGACTAATGCTTTTGACAAGAGAAATGACCTTCCTTCCATGCTTCAATTGATCGCCATTCGACGAATTGGCATTACTCCAATTTTTTTGGTGCCCCTGGGTGATACACTGGATGCCGATATAATTGTTCTTGCTGATAGGCCTTGGCTGTTGCATAGTGCAAGACAAGGCCTTTCCTATACTTCTATCTCATTTCAACCAGCCACACATGTAACTCCTGTTTCCTGTGTTGAGTTTCCAAAAGGAATATTATTTGTTGCAGAAAACAGTTTACATCTGGTGGAGATGGGCCACGGCAAGAGACTTAATGTGCAGAAGTTTCATTTAGAGGGCACTCCACGGAAGGTCTTGTATCATGATGAAAGCAAGATGTTGCTTGTGATGAGGACTGAACTGAATTGTGGTCCATGTTTGTCTGACATATGTTGTGTGGATTCCCTAAGTGGGTCAGTACTGTCATCTTTTAGACTTGAACTTGGAGAAACAGGAAAATCTATGGAATTAGTAAGAGTTGGAAGTGAGCAGGTGCTTGTTGTTGGAACTAGTCTGTCTTCTGGTCCGCACACAATGCCCACTGGTGAAGCTGAAAGTTGCAAGGGTCGTCTTCTTGTTCTCTGTCTTGATCATGTGCAAAATTCAGATAGTGGTTCAATGACATTCTGTTCAAAGGCAGGGTCATCATCTCAAAAAACTTCACCATTCCATGAAATTGTTACATATGCTCCTGAACTGTTATCGAGCAGTAGCCTTGGCAGCAGTCCGGATGATAATAGTTCTGATGGCATCAAACTTCATGAAAATGAAGTATGGCAGTTCCGATTGGCTTATGCAACTAAATGGCCAGGAGTTGTACTTAAAATCTGTCCTTATCTTGATCATTACTTCTTGGCAACAGCTGGCAATGCTTTCTATGTTTGTGGTTTCCCTAATGACAATCCTCAAAGAGTGAGAAGGTATGCTATGGGAAGGACGCGCTACATGATAACATCTTTGACTGCACATTTGACTAGAATTGCAGTTGGTGATTGTCGTGATGGTATCCTTTTATATTCTTATCATGAGGAAGCAAAAAAATTGGAGCTACTTTACAATGACCCATCACAAAGGATAGTTGCTGATTGCATTCTCATGGATGCTGATACTGCTGTTGTTTCGGATCGTAAAGGAAGCATTGCTGTTTTATGTTCAGATCACTTGGAAGCATCAGACAATGCAGGTGCACAATGCAACATGACACTAAGCTGCGCTTATTTCATGGCTGAGATAGCTATGAGCATCAAGAAGGGCTCATATTCATACAGACTTCCAGCTGATGATGTTTTGGAAGGTGGAAATGGCCCCAAGACAAATGTTGATTCATTACAAAATACTATTATTGCCAGTACCCTGTTAGGAAGCATAATGATCTTCATTCCTTTATCAAGGGAAGAATATGAGCTCTTAGAAGTAGTGCAAGCAAGACTTGTTGTCCATCATTTGACAGCGCCTGTTCTAGGAAATGATCATCATGAGTTTCGCAGTCGCGAAAATCGGGTTGGAGTACCCAAGATACTTGATGGTGACATCTTGACCCAGTTTCTGGAGCTGACAAGTATGCAGCAAAAGATGATTTTGTCACTGGAGCAACCGGATATGGTAAAACCAAGTTTGAAGCCACTCCTACCCTCTCATGTTTCTGTAAATCAGGTGGTTCAACTTCTTGAACGAGTCCATGATGCTCTGAACTAA 4122 0.4158 MAVSEEECSSAKSGSSGPSSSSSSASRYYLSKCVFRGSVVLHVLHAHIRSPSSNDVVFGKETSIELVVIDEDGNVQSVFDQPVFGTLKDLAILPWNEKFRAARDPQLWGKDLLVATSDSGKLSLLTFCNEMHRFVPVTHIQLSNPGNQMDFPGRKLAVDSSGCFIAASAYEDRLALFSLSMSSGDIIDERIVYPSESEGTASTSRSIQRTSISVTIWSICFISQDSRQPSKEHNPVLALIINRREALLNELLLLEWNVKARKIFVISQYVEAGPLAHDIVEVPNSGGLAFLFRAGDVLLMDLRDHRNPSCVCKTNLNFLPHAMEEQTYVEDSCKLHDVDDERFSVAACALLELSDYDPMCIDSDNGGANSGYKYICSWSWEPENNRDPKMIFCVDTGEFFMIEVLFNSEGPKVNLSECLYKGLPCKALLWVEGGYLAALVEMGDGMVLKLEDGRLCYTNPIQNIAPILDMEVVDYHDEKHDQMFACCGVAPEGSLRIIRNGINVENLHRTASIYQGVSGTWTVRMKVTDSHHSFLVLSFLDETRILSVGLSFTDVTDSVGFQPNVCTLACGLVTDGLLVQIHRSTVKLCLPTKASHSEGIPLSSPICTSWSPDNVGISLGAVGHNFIVVSTTNPCFLFILGVRLLSVYQYEIYEMQHLVLQNELSCISIPGQEIEQKQSNSSISANNSSISSFQSGVDINKTFVIGTHKPSVEIWFFAPGGGITVVACGTISLTNTIGSVKSDSIPQDVRLVSADKYYVLAGLRNGMLLRFEWPAEPCPSSPINMVDTALSSTNLVNSVTNAFDKRNDLPSMLQLIAIRRIGITPIFLVPLGDTLDADIIVLADRPWLLHSARQGLSYTSISFQPATHVTPVSCVEFPKGILFVAENSLHLVEMGHGKRLNVQKFHLEGTPRKVLYHDESKMLLVMRTELNCGPCLSDICCVDSLSGSVLSSFRLELGETGKSMELVRVGSEQVLVVGTSLSSGPHTMPTGEAESCKGRLLVLCLDHVQNSDSGSMTFCSKAGSSSQKTSPFHEIVTYAPELLSSSSLGSSPDDNSSDGIKLHENEVWQFRLAYATKWPGVVLKICPYLDHYFLATAGNAFYVCGFPNDNPQRVRRYAMGRTRYMITSLTAHLTRIAVGDCRDGILLYSYHEEAKKLELLYNDPSQRIVADCILMDADTAVVSDRKGSIAVLCSDHLEASDNAGAQCNMTLSCAYFMAEIAMSIKKGSYSYRLPADDVLEGGNGPKTNVDSLQNTIIASTLLGSIMIFIPLSREEYELLEVVQARLVVHHLTAPVLGNDHHEFRSRENRVGVPKILDGDILTQFLELTSMQQKMILSLEQPDMVKPSLKPLLPSHVSVNQVVQLLERVHDALN* 1374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1714 1373 MobiDBLite consensus disorder prediction 1 24 - -
Gso19g1714 1373 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 111 669 IPR018846 -
Gso19g1714 1373 MobiDBLite consensus disorder prediction 8 24 - -
Gso19g1714 1373 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 22 1370 - -
Gso19g1714 1373 Gene3D - 502 898 IPR015943 GO:0005515
Gso19g1714 1373 Pfam CPSF A subunit region 939 1326 IPR004871 GO:0003676|GO:0005634
Gso19g1714 1373 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR (CPSF) A SUBUNIT PROTEIN 22 1370 - -
Gso19g1714 1373 Gene3D - 39 460 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1714 Gso-Chr19 46024326 46040613 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1714 K12830 - gmx:100799711 2668.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1714 19 46024326 46040613 Gso3g1744 3 43261393 43275981 GST