Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1566 ATGGAAAACACAACATCAAAGCCTGAGGTCCTAATAAAGCCAATTATCCTCAAAGCTGGTGTTCCTTTGGCTGTGTCTTTTGCTGGTTGCATCTATGCTTGGTTCGTGGCAAAGAAAAGCCTCTCTAAAACCTCTTCTTTATCACTAAATGAAGGAAGTTCCCACGAAACCAATTCCCATCTTGAGCCAAACTATGAAGAAAGTTGTCATAGTCATAGCCTTTCATGTTTGGAAGATGAAGGACATAGTACAACAATAGATCAAAGTGTTGTTGCTGAAAGTTCGATGATCAATGACACCCCGTGTTTAGAAGAAGAGATTAATGGCCTGAGAAGCATGATTGAAGGTATGCATATGAAGGAGTTGGCCTTACGTTTGCAGTTTGGTCGCTATTGTGATATGAAAGAGCAAGAAACTGTGGTTGGGGAGATAAAAAACATGTTGTCACTGGAGACTGCTCGTGTTGGCTTCTTGGACAGGGAGATTTCGTCGATGGAGATGCAGAATAGGAGGTTGGAGAGTTTTGTTGCTCAATATCTCAGAGTTGTGGAACAGATTGAGCGTTGGAAATCTGAGAATAGAATGCTTCGGAGGAAGTTTCAGAAGCTAATGAGGAAATCAAAGGCACAAACCCGCCTCGCGAAGGAGCAGGCTTCGAAGCTCAAACTGGAAGAAGAAGAAATCTTGAGAAGCCGTGATGCCTTGGAAACAAAAATTGATGTCATAGGTAAACTTGAGGATAAAATGGAAGAGCTGCAGAGGGCTTTGGATCAATTGCAGGATGAGAAGAATGAACTTCTGAAGAAGCTTGACACAGCAGAAAAATCCTATGCTTCTAAGATTGAAGCAGGAGATGTAAGTAGGGAAGAGTACACAAAGCTTCTGGATGAATTGGAGCAGGCCAAGAAAGAACGAGCAGATGAAGCTAAAGAACTGATTTACTTGCGGTGGACAAATGCTTGTTTAAGGCATGATCTAGTGAGGCACCATGAACAACAACAGAACCAGGATAAAAACCATTTAGAATTGGAATTTGGAAGAAATGATGTACTTATCCATTATGACTCAGAGCATGAACTACACAATTCCCTTTTGGAGCATCACAGTGATCCTTCCTTTGATGAGCATACTAGGGGTCATGATCACAGTGACAGTGCTTGTTCAAAAAGGACAAAGTTGCTTGAAAGGCTAAAGAGATGGGTTGATGGCAGTGAAAAAGCGAGGGTTAGGCATTCTGTTTCCAAAGGGGCAGAGGAACATCTAGTTCCTAGAAGGAAGTCATGCTCTAGTGCTTGA 1296 0.4213 MENTTSKPEVLIKPIILKAGVPLAVSFAGCIYAWFVAKKSLSKTSSLSLNEGSSHETNSHLEPNYEESCHSHSLSCLEDEGHSTTIDQSVVAESSMINDTPCLEEEINGLRSMIEGMHMKELALRLQFGRYCDMKEQETVVGEIKNMLSLETARVGFLDREISSMEMQNRRLESFVAQYLRVVEQIERWKSENRMLRRKFQKLMRKSKAQTRLAKEQASKLKLEEEEILRSRDALETKIDVIGKLEDKMEELQRALDQLQDEKNELLKKLDTAEKSYASKIEAGDVSREEYTKLLDELEQAKKERADEAKELIYLRWTNACLRHDLVRHHEQQQNQDKNHLELEFGRNDVLIHYDSEHELHNSLLEHHSDPSFDEHTRGHDHSDSACSKRTKLLERLKRWVDGSEKARVRHSVSKGAEEHLVPRRKSCSSA* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1566 431 Coils Coil 186 226 - -
Gso19g1566 431 Coils Coil 284 311 - -
Gso19g1566 431 MobiDBLite consensus disorder prediction 47 66 - -
Gso19g1566 431 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 431 IPR040265 -
Gso19g1566 431 MobiDBLite consensus disorder prediction 409 425 - -
Gso19g1566 431 Coils Coil 235 276 - -
Gso19g1566 431 MobiDBLite consensus disorder prediction 409 431 - -
Gso19g1566 431 PANTHER CHUP1-LIKE PROTEIN 1 431 - -
Gso19g1566 431 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1566 Gso-Chr19 44606423 44608534 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1566 - - gmx:100805210 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1566 19 44606423 44608534 Gso3g1585 3 41797323 41799697 GST
Gso19g1566 19 44606423 44608534 Gso10g0552 10 6170937 6172909 PCT
Gso10g0552 10 6170937 6172909 Gso19g1566 19 44606423 44608534 PCT