Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0552 ATGGGACTCACAGCACTGAAGGCAGAGAATCTGAAGCCAGTAATCCTCCTCAAAGCTGGTGTTCCCTTGGCTGTATCTTTGGCTGGTTTGATCTATGCATGGATTGTTGCAAAGAAAAACTTATCTACCAAAGTTTTTTCTTCACCAGAAAAAGAGTGTGTTTCTCCAAAAATCACTTGTCATCAAGGAACAAAACATGAAGAAAGCTTTCTTCACAATCTTTCTTCTATTAAATATGAAGAATCATCATTTTCTCCCATGAATAGCAGTGTTCTTTCTGGGAGCTTGGTGATCCATGATCACAACAACTGTTGTTTGGAACAAGAGATCACTAGCCTAAGAAGCCAAATTGAAGGACTTCAAATGAGGGAATTGGCCTTGCGTTTGCAGTTTGAGCTGTATTGTGAAATGAAGGAACAAGAATCTTTGCTTCTAGATGTCAAAAACATGTTGTCTTTGGAGAATGATCGCGCTGAGTTCTTGAGTAAAGAGATTTCGTCGATAGAGACCGAGACTAAGAGGTTGGAGAGTTTTGTAGTCCAATACATGAGTGTTGTTGAAGAGCATCAATATTGGAAATCACAGAATAGGGTGCTTCAAAGGAGGGTTCAAAGGCTACTTAGGGACTCAAAGGCCAAATCTCGTTTGATAAAGTGTCAGGCTTTGAAGATCAAAGAGAAAGAAGAAGAGATATTGAGAAACCATGATGCCTTGCAAACAAGGGTATGTGTTATTAACAAGTTAGAGGGTGAAATCATGGAGCTACAAAGGATTTTGGAACAATTGGAGGATGAGAAGGACGAGGTTGTGAAGAAGCTTGAAACCGCAGAAGCGTATGCATCTAAGTTAGACAAGGAAAAGATGCATAGAAAACCTTTGAAATACTATTTGGAGGTTGAATCAAGAGATGTGAATAAGGAGGACTACACCAAGGTTCTCAGTGAATTGGAGGAAATCAAGAAGGATCGCGCAACTGAAATTGAAGAGCTGATTCATCTGAGGAGGGTCAATGCTTGCTTAAGGGAAGAGTTGATGAGGCACTATGAAGAACAACATGAGCAAGATAGAGATCATGAAGAAGTGGAATTTGAAGGAGGCTTAGGAGTTGTGAAATATGAGTCAGAGCATGAATTGCATCATTCCCTTTTGGAGCATCAAAATGGTTCTTCTGCTCATGGTGATCATGCTGCTTCCAAAAGGAGAAAGTTGCTTAAGAGGCTCAAGAGGTGGGTTGAAGGAAGTGAAAAGGTAAGAGTGAAGCCTGAAATAAAGTGCCTTGATATGCATTCTGGTTCCTATGGATCAAAGAAACCACAAGTTCCTCCAAGTGTAAGGTTCTGCTCTAGTGCTTGA 1353 0.4043 MGLTALKAENLKPVILLKAGVPLAVSLAGLIYAWIVAKKNLSTKVFSSPEKECVSPKITCHQGTKHEESFLHNLSSIKYEESSFSPMNSSVLSGSLVIHDHNNCCLEQEITSLRSQIEGLQMRELALRLQFELYCEMKEQESLLLDVKNMLSLENDRAEFLSKEISSIETETKRLESFVVQYMSVVEEHQYWKSQNRVLQRRVQRLLRDSKAKSRLIKCQALKIKEKEEEILRNHDALQTRVCVINKLEGEIMELQRILEQLEDEKDEVVKKLETAEAYASKLDKEKMHRKPLKYYLEVESRDVNKEDYTKVLSELEEIKKDRATEIEELIHLRRVNACLREELMRHYEEQHEQDRDHEEVEFEGGLGVVKYESEHELHHSLLEHQNGSSAHGDHAASKRRKLLKRLKRWVEGSEKVRVKPEIKCLDMHSGSYGSKKPQVPPSVRFCSSA* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0552 450 MobiDBLite consensus disorder prediction 429 450 - -
Gso10g0552 450 Coils Coil 245 279 - -
Gso10g0552 450 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 450 IPR040265 -
Gso10g0552 450 PANTHER CHUP1-LIKE PROTEIN 1 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0552 Gso-Chr10 6170937 6172909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0552 - - gmx:100819954 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1566 19 44606423 44608534 Gso10g0552 10 6170937 6172909 PCT
Gso3g1585 3 41797323 41799697 Gso10g0552 10 6170937 6172909 PCT
Gso10g0552 10 6170937 6172909 Gso19g1566 19 44606423 44608534 PCT
Gso10g0552 10 6170937 6172909 Gso3g1585 3 41797323 41799697 PCT