Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1551 ATGGTTTTCCAAACAAGCAATAATCCCCATTTCGTATTGTTTCCCCTAATGGCTCAAGGCCACATCATCCCCATGATGGACATTGCAAGACTATTGGCGCGGCGTGGTGTGATTGTTACCATATTCACTACCCCAAAGAATGCATCACGTTTCAATTCTGTTCTTTCTCGTGCTGTTTCATCAGGCCTCCAAATCCGGCTAGTTCAACTCCACTTTCCATCCAAAGAAGCAGGACTACCCGAAGGGTGCGAGAATTTCGACATGTTAACATCAATGGACATGATGTACAAAGTCTTCCACGCCATCAGCATGCTCCAAAAGTCAGCAGAGGAGTTGTTTGAAGCACTGATACCAAAACCAAGTTGCATAATCTCTGACTTTTGCATTCCTTGGACCGCTCAAGTAGCTGAAAAGCATCATATTCCAAGGATTTCGTTTCACGGTTTTTCTTGCTTCTGCCTCCATTGTCTGCTCATGGTACACACTTCAAATATTTGTGAAAGCATCACTTCAGAATCCGAGTACTTCACTATCCCCGGCATACCTGGTCAAATTCAAGCTACCAAAGAGCAGATACCTATGATGATCTCAAATTCAGATGAAGAAATGAAGCACTTCGGGGACCAGATGCGTGATGCTGAAATGAAGTCATACGGGCTAATCATAAACACTTTTGAAGAGTTGGAGAAGGCATACGTGACGGATTACAAGAAGGTGAGAAATGATAAGGTGTGGTGCATTGGTCCTGTTTCATTCTGTAACAAAGATGATTTGGATAAAGCTCAAAGAGGCGACCAGGCCTCAATTAATGAGCACCATTGCCTGAAATGGCTAGATTTGCAGAAATCCAAGTCTGTGGTCTATGTTTGTTTTGGAAGCTTATGCAACTTGATTCCTTCACAACTTGTAGAGCTGGCATTGGCCTTGGAAGATACTAAAAGACCATTTGTATGGGTTATTAGAGAGGGAAGTAAGTACCAAGAGTTGGAAAAATGGATCAGTGAAGAAGGGTTTGAGGAAAGGACCAAAGGGAGAGGCCTTATAATTCGAGGTTGGGCTCCACAAGTGCTAATATTATCACACCATGCCATTGGAGGATTCTTAACACATTGTGGTTGGAATTCAACACTTGAAGGGATAGGTGCTGGATTGCCAATGATTACCTGGCCTCTATTTGCTGATCAATTTTTGAATGAGAAGCTTGTTACTAAAGTGTTGAAGATTGGTGTGAGCGTAGGGGTAGAGGTTCCCATGAAGTTTGGAGAGGAAGAGAAAACAGGGGTGTTGGTGAAGAAGGAAGATATTAATAGGGCAATATGCATGGTGATGGATGATGATGGAGAAGAAAGCAAAGAGAGAAGAGAAAGGGCAACCAAACTCAGTGAGATGGCAAAGAGAGCAGTTGAAAATGGAGGGTCTTCTCATCTTGACTTGAGTTTGCTTATCCAAGACATTATGCAACAATCTAGTAGCAAGGAGGAAATAATGTCGACGCCTAAAGAGTCACAATTTTCATGTAACGTTTGA 1527 0.4257 MVFQTSNNPHFVLFPLMAQGHIIPMMDIARLLARRGVIVTIFTTPKNASRFNSVLSRAVSSGLQIRLVQLHFPSKEAGLPEGCENFDMLTSMDMMYKVFHAISMLQKSAEELFEALIPKPSCIISDFCIPWTAQVAEKHHIPRISFHGFSCFCLHCLLMVHTSNICESITSESEYFTIPGIPGQIQATKEQIPMMISNSDEEMKHFGDQMRDAEMKSYGLIINTFEELEKAYVTDYKKVRNDKVWCIGPVSFCNKDDLDKAQRGDQASINEHHCLKWLDLQKSKSVVYVCFGSLCNLIPSQLVELALALEDTKRPFVWVIREGSKYQELEKWISEEGFEERTKGRGLIIRGWAPQVLILSHHAIGGFLTHCGWNSTLEGIGAGLPMITWPLFADQFLNEKLVTKVLKIGVSVGVEVPMKFGEEEKTGVLVKKEDINRAICMVMDDDGEESKERRERATKLSEMAKRAVENGGSSHLDLSLLIQDIMQQSSSKEEIMSTPKESQFSCNV* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1551 508 CDD GT1_Gtf-like 9 480 IPR002213 GO:0008194
Gso19g1551 508 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 273 404 IPR002213 GO:0008194
Gso19g1551 508 Gene3D Glycogen Phosphorylase B; 275 469 - -
Gso19g1551 508 Gene3D Glycogen Phosphorylase B; 6 274 - -
Gso19g1551 508 ProSitePatterns UDP-glycosyltransferases signature. 352 395 IPR035595 -
Gso19g1551 508 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 487 - -
Gso19g1551 508 PANTHER GLYCOSYLTRANSFERASE 5 497 - -
Gso19g1551 508 PANTHER GLYCOSYLTRANSFERASE 5 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1551 Gso-Chr19 44473199 44475196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1551 10 492 Glycosyltransferase AT2G36760 56.612 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1551 K13496 K22771 gmx:100778817 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1551 19 44473199 44475196 Gso10g0536 10 5982237 5984344 PCT
Gso10g0536 10 5982237 5984344 Gso19g1551 19 44473199 44475196 PCT