Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0536 ATGAGTTCCCAAACACGCAACCTCAACTTTGTTCTGTTTCCTCTGATGTCCCAGGGCCACATGATCCCCATGATGGACATAGCAAAAATTCTGGCACAGAACGGTGTTACTGTCACAGTGGTCACAACCCACCAAAACGCATCACGCTTCACATCAACTTTTTCTAATTCCCAAATCCGATTACTCGAAGTTCAATTCCCATACCAAGAAGCAGGGTTGCCAGAAGGGTGTGAGAATCTCGACATGTTACCTTCACTTGGCACAGGCTTGGATTTCTTCAACGCTGCAAACAGCAACACCCTGAAGGAGCAAGTTGAAAAACTCTTTGAAGAGTTAAACCCTCCACCAAGCTGCATAATTTCCGACATGACTCTGCATTACACAGCAAACATTGCTAGAAAATTCAATATTCCTAGGTTTTCATTCCTGGGACAGAGTTGCTTCAGTCTCTTTTGTTTGTACAACATAGGAGTCCACAAAGTTCGGTCAACGATTACCTCGGAGACAGAGTACTTTGCTCTGCCCGGTCTGCCCGACAAGGTTGAGTTTACCATAGCACAGACTCCAGCACACAATTCTAGTGAAGAGTGGAAGGAGTTTTATGCCAAAACCGGTGCTGCTGAAGGGGTTTCATTTGGGGTGGTGATGAATTCATTTGAAGAGTTGGAGCCAGAATATGCCAAGGGTTACAAAAAAGCAAGAAATGGAAGAGTTTGGTGCATTGGTCCTGTTTCACTCAGCAACAAGGATGAACTAGACAAGGCTGAGAGAGGGAACAAGGCTTCAATTGATGAGCATTTTTGCTTGAAGTGGCTTGATTCGCAGAAACCAAAGGGTGTGATCTATGTGTGCCTTGGAAGCATGTGTAACATAACATCACTTCAGTTAATAGAGCTTGGTTTGGCCTTGGAAGCCTCAAAAAGACCCTTCATTTGGGTCATTAGGGAAGGGAATCAATTGGGGGAATTGGAGAAGTGGATTAAGGAAGAGGGGTTTGAGGAAAGGACCAAAGATCGAAGCCTTGTGATTCATGGTTGGGCTCCTCAGGTACTGATTCTTTCACACCCTTCGATTGGAGGGTTTTTGACACACTGTGGTTGGAACTCAACTTTGGAAGCTGTATGTGCTGGTGTGCCTTTGATTACATGGCCTCTATTTGGAGACCAGTTTTTCAATGAGAAACTTGTTGTGCAAATACTAAGAGTTGGAGTGAAGGTTGGGGTGGAGGTTCCTGTGGAGTGGGGTGAGGAAGATGAGAATGGTCTTTTGGTGAAGAAAGAAGATGTTGGGAGAGCTATTAATGAGTTGATGGATGAGAGTAGGGATAGTGAAGAAATGAGGGAAAGGGTTAATGGACTTGCAGAGATGGCTAAGAGAGCTGTTGAAAAAGGTGGATCTTCTCACTCCAATGTCACACTCCTTATCCAAGATGTCATGCAACAAAACAAGAGAGATACTTAA 1461 0.4442 MSSQTRNLNFVLFPLMSQGHMIPMMDIAKILAQNGVTVTVVTTHQNASRFTSTFSNSQIRLLEVQFPYQEAGLPEGCENLDMLPSLGTGLDFFNAANSNTLKEQVEKLFEELNPPPSCIISDMTLHYTANIARKFNIPRFSFLGQSCFSLFCLYNIGVHKVRSTITSETEYFALPGLPDKVEFTIAQTPAHNSSEEWKEFYAKTGAAEGVSFGVVMNSFEELEPEYAKGYKKARNGRVWCIGPVSLSNKDELDKAERGNKASIDEHFCLKWLDSQKPKGVIYVCLGSMCNITSLQLIELGLALEASKRPFIWVIREGNQLGELEKWIKEEGFEERTKDRSLVIHGWAPQVLILSHPSIGGFLTHCGWNSTLEAVCAGVPLITWPLFGDQFFNEKLVVQILRVGVKVGVEVPVEWGEEDENGLLVKKEDVGRAINELMDESRDSEEMRERVNGLAEMAKRAVEKGGSSHSNVTLLIQDVMQQNKRDT* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0536 486 CDD GT1_Gtf-like 8 470 IPR002213 GO:0008194
Gso10g0536 486 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 273 397 IPR002213 GO:0008194
Gso10g0536 486 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 482 - -
Gso10g0536 486 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 482 - -
Gso10g0536 486 Gene3D Glycogen Phosphorylase B; 269 462 - -
Gso10g0536 486 ProSitePatterns UDP-glycosyltransferases signature. 346 389 IPR035595 -
Gso10g0536 486 Gene3D Glycogen Phosphorylase B; 1 268 - -
Gso10g0536 486 PANTHER GLYCOSYLTRANSFERASE 7 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0536 Gso-Chr10 5982237 5984344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0536 8 481 Glycosyltransferase AT2G36760 56.757 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0536 K13496 K22771 gmx:100790358 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1551 19 44473199 44475196 Gso10g0536 10 5982237 5984344 PCT
Gso10g0536 10 5982237 5984344 Gso19g1551 19 44473199 44475196 PCT