Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1527 ATGGGAGAGAAAAAAGAAGCGGCGAAGAATGAAGCAGATAAGAAGCCTGAATCAGGAGCAAAGCAAAACGACGAACCAGTACCTGTCGTTTTGAAACTCGACATGCATTGCGAGGGATGTGTCAAGAAGATCAACCGCGCCGTTCGCCATTTCGAAGGTGTTGAAGACGTTAAGGCCGATCTATCAAGTAACAAACTAACGGTTATTGGAAAACTCGACCCTGCCGAAGTGCGAGATAAACTAGCGGAGAAAACTAGGAAGAAGGTCGAACTCGTTTCTCCTCAGCCTAAGAAGGATTCCGCCGGCGATAAGCCGCCGGAGAAGAAGACCGAAGAGAAAAAAACCGAAGAGAAGAAATCGGAAGATAAAAAGGCAGAAGAGAAAGCTCCGAAAGAGAGCACGGTGGTGTTGAAGATCAGATTGCACTGTGACGGTTGCGTTCAGAAGATTCGAAAGATTATCCTCAAAAGCAAAGGAGTTGAATCGGTGAACATTGAGGGAGGGAAGGATTTGGTGAGCGTAAAGGGGACGATGGACGTGAAGGAAATAGTACCGTATTTGAACGACAAGTTGAAGCGGAACGTTGAAGTGGTCCCGCCCAAGAAAGAGGGTGGTGATAATAAGAAAGAGAACAAGGAAGGTGGTGGTGGAGATAGTAAGAAAGAGGGTGGAAAAAAACAAGAAGGTGAAGACGGTGCAGCGAAGGTGGAGGTTAACAAAATGGAGCACTACGGGTACGGGTACGGGTACCCACCTCCCCCTATGTACTGGTACGGTCACGGTGGATACGCACCTGGTGAAAGTAGTAGCTACGAGGCAGAGGTTCAACCAGGGTATAATTCGTATTCGAATCAAGGGTATGATGGTAATTACGGGAATTACCATTACCAAGGGTATAATAATAATTACATGATGGCACAACCACCACCCCCGTTCTACTTGAATCCTCACCATCCTCCTCCACAGATGTTCAGCGATGAGAATCCCAATGCGTGTTCCGTGATGTGA 1008 0.4722 MGEKKEAAKNEADKKPESGAKQNDEPVPVVLKLDMHCEGCVKKINRAVRHFEGVEDVKADLSSNKLTVIGKLDPAEVRDKLAEKTRKKVELVSPQPKKDSAGDKPPEKKTEEKKTEEKKSEDKKAEEKAPKESTVVLKIRLHCDGCVQKIRKIILKSKGVESVNIEGGKDLVSVKGTMDVKEIVPYLNDKLKRNVEVVPPKKEGGDNKKENKEGGGGDSKKEGGKKQEGEDGAAKVEVNKMEHYGYGYGYPPPPMYWYGHGGYAPGESSSYEAEVQPGYNSYSNQGYDGNYGNYHYQGYNNNYMMAQPPPPFYLNPHHPPPQMFSDENPNACSVM* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1527 335 Pfam Heavy-metal-associated domain 138 193 IPR006121 GO:0046872
Gso19g1527 335 Pfam Heavy-metal-associated domain 33 88 IPR006121 GO:0046872
Gso19g1527 335 MobiDBLite consensus disorder prediction 195 234 - -
Gso19g1527 335 CDD HMA 141 184 IPR006121 GO:0046872
Gso19g1527 335 SUPERFAMILY HMA, heavy metal-associated domain 134 189 IPR036163 GO:0046872
Gso19g1527 335 CDD HMA 35 90 IPR006121 GO:0046872
Gso19g1527 335 Coils Coil 108 128 - -
Gso19g1527 335 MobiDBLite consensus disorder prediction 1 21 - -
Gso19g1527 335 MobiDBLite consensus disorder prediction 100 132 - -
Gso19g1527 335 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 1 335 IPR044594 GO:0046872
Gso19g1527 335 MobiDBLite consensus disorder prediction 1 27 - -
Gso19g1527 335 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 335 - -
Gso19g1527 335 SUPERFAMILY HMA, heavy metal-associated domain 30 89 IPR036163 GO:0046872
Gso19g1527 335 MobiDBLite consensus disorder prediction 83 132 - -
Gso19g1527 335 Gene3D - 23 90 - -
Gso19g1527 335 Gene3D - 131 203 - -
Gso19g1527 335 ProSiteProfiles Heavy-metal-associated domain profile. 35 83 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1527 Gso-Chr19 44164120 44166116 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1527 - - gmx:100795652 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1527 19 44164120 44166116 Gso3g1545 3 41351231 41353227 GST