Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1503 ATGGCAAAGCTATTCAATTTCCTCCCTCTCCTCTTCCTCAACATCTTCATTCAAACAATTTCAGCCCAAGTAGCACCAGCACCAGCGGGCCCCACCAACATCACCCAAGTTCTTGAGAAAGCAGGCCAATTCACAACCTTCATCAAACTTCTCAAGGCCTCACAAATAGCTGATAGAATCAATTCGCAGCTCAACAACTCAAACCAAGGCCTAACCGTATTTGCACCCACTGATAATGCATTCTCAAGCCTCAAAGCAGGGACACTAAACTCCATAAACTCACAAGACCAAATGCAGTTGATACAGTTCCACATTCTCCCCACTCTCTACACCATCTCACAGTTCCAAACCGCAAGCAACCCTTTGCACACGCAAGCTGGGAACAGTGATGATGGAGAGTACCCTTTAAATGTCACCACCTCAGGGAACCAAGTGAATGTAACAACTGGGGTGGTTGATACTACAGTGTCCAATACTATCTACAGTGATAACCAGCTTGCAGTGTATCAGGTAGATAAGGTACTTCTTCCAATGAAGCTTTTCGGCGCAACGGCACCGGCTGCTTCACCGGCAGAGGCTCCGGCACCGACCAAGCCGGAGAAAAATGTCCGGGCTGGGGCTGCTGATTCTCCTTCAGGGTCGTCGGACACGTCCGCTGATGCTTCGAGTGCAGTGAGTTTGAAAAGGCACACAGTTGAAGGTGTTACCTTTGTTGCTGCAGTTGTTGTCATGATTGTTTCTTGTTTCTGA 750 0.4813 MAKLFNFLPLLFLNIFIQTISAQVAPAPAGPTNITQVLEKAGQFTTFIKLLKASQIADRINSQLNNSNQGLTVFAPTDNAFSSLKAGTLNSINSQDQMQLIQFHILPTLYTISQFQTASNPLHTQAGNSDDGEYPLNVTTSGNQVNVTTGVVDTTVSNTIYSDNQLAVYQVDKVLLPMKLFGATAPAASPAEAPAPTKPEKNVRAGAADSPSGSSDTSADASSAVSLKRHTVEGVTFVAAVVVMIVSCF* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1503 249 ProSiteProfiles FAS1/BIgH3 domain profile. 31 175 IPR000782 -
Gso19g1503 249 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 244 IPR045003 -
Gso19g1503 249 MobiDBLite consensus disorder prediction 187 220 - -
Gso19g1503 249 Gene3D FAS1 domain 16 177 IPR036378 -
Gso19g1503 249 SUPERFAMILY FAS1 domain 30 177 IPR036378 -
Gso19g1503 249 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 3 244 - -
Gso19g1503 249 Pfam Fasciclin domain 43 177 IPR000782 -
Gso19g1503 249 SMART fasc_3 72 178 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1503 Gso-Chr19 43860729 43862452 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1503 - - gmx:100805219 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1503 19 43860729 43862452 Gso3g1517 3 41057190 41058179 GST