Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1475 ATGGCGGCCATAACCCGACTCGTAAAGCGCACCTCCCCCCTCTCTTCCGTGGCGCGTGGGTTCTCATCTCACGCGCCTCCGTGCAAGGAGGAGAGGAATGTCCAGTGGGTGTTCCTGGGTTGCCCTGGCGTCGGAAAAGGCACCTATGCCAGCCGCCTCTGCAACCTCCTCGGCGTCCCTCACATCGCCACTGGCGATCTTGTCCGCCACGAGCTCGCCTCCAACGGCCCCCTTTCTTCCCAGCTATCAGAAATTGTTAATCAAGGCAAATTGGTGTCAGATGAAATCATAATAAGTTTATTGTCAAAGAGGCTGGCTGATGGGGAAGCTAAAGGCGAATCAGGATTTATTCTTGATGGTTTTCCTCGAACAATAAATCAAGCAGAAATATTGGAAGGGGTAACTGACATTGACTTGGTGGTCAATCTGAAGCTCCAAGAAGAAGCACTGCTTGCAAAATGCCTTGGTAGAAGAATTTGTAATCAATGTGGAGGAAATTTTAATATTGCCTCCATTAGCGTCAAGGGTGAGAATGGGCGTCCTGGAATGGTCATGGCTCCACTTCTTCCTCCTGCACACTGTATGTCAAAGCTCATTACTCGGTCAGATGATACTGAAGCAGTAGTCAAAGAAAGGCTTCGTATATACAATGAAAAGAGTCAGCCCGTGGAGGAATTTTACCGTAGTAGAGGGAAACTGTTGGAGTTTGACCTGCCAGGAGGTATCCCAGAATCTTGGCCTAAGTTGCTGCAAGCTCTTAATCTTGATGATTATGAGGAGAAGCAATCTGTTGCAGCATAA 801 0.4856 MAAITRLVKRTSPLSSVARGFSSHAPPCKEERNVQWVFLGCPGVGKGTYASRLCNLLGVPHIATGDLVRHELASNGPLSSQLSEIVNQGKLVSDEIIISLLSKRLADGEAKGESGFILDGFPRTINQAEILEGVTDIDLVVNLKLQEEALLAKCLGRRICNQCGGNFNIASISVKGENGRPGMVMAPLLPPAHCMSKLITRSDDTEAVVKERLRIYNEKSQPVEEFYRSRGKLLEFDLPGGIPESWPKLLQALNLDDYEEKQSVAA* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1475 266 Gene3D - 22 255 IPR027417 -
Gso19g1475 266 Pfam Adenylate kinase 39 231 - -
Gso19g1475 266 CDD ADK 35 237 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso19g1475 266 PANTHER NUCLEOTIDE KINASE 28 266 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso19g1475 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 254 IPR027417 -
Gso19g1475 266 PRINTS Adenylate kinase signature 37 50 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso19g1475 266 PRINTS Adenylate kinase signature 65 79 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso19g1475 266 PRINTS Adenylate kinase signature 116 132 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso19g1475 266 PRINTS Adenylate kinase signature 201 216 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso19g1475 266 PRINTS Adenylate kinase signature 218 232 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso19g1475 266 ProSitePatterns Adenylate kinase signature. 116 127 IPR033690 -
Gso19g1475 266 Hamap Adenylate kinase [adk]. 34 254 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso19g1475 266 PANTHER ADENYLATE KINASE 28 266 - -
Gso19g1475 266 TIGRFAM adk: adenylate kinase 35 254 IPR006259 GO:0004017|GO:0005524|GO:0016776
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1475 Gso-Chr19 43600596 43603464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1475 K00939 - gmx:102666238 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1475 19 43600596 43603464 Gso3g1490 3 40819924 40822109 GST
Gso19g1475 19 43600596 43603464 Gso10g0420 10 4462973 4466716 PCT
Gso10g0420 10 4462973 4466716 Gso19g1475 19 43600596 43603464 PCT