Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0420 ATGGTGGCCGTAACCCGCCTCGCGAAGCGCGCGTCAACCTTCTCACCCCAGATGAGGAGGTGCCTGAGCTCCTCCGAAGTCAAATCCCACGCGCCGCCGCACGACGCCGCGTCCTTCCGCCCGTTTCCGCGGCGCGAAGATCTGAGCAAGCGGTGCGTGCAGTGGGCGTTCCTCGGCTGCCCCGGCGTCGGAAAAGGAACGTACGCTAGTCGCCTGTCCAACCTCCTCGGCGTCCCTCACATCGCCACCGGCGATCTCGTTCGCGACGAACTCGCCTCCTCTGACCCCCTTTCTTCCCAGCTATCAGAAATTGTAAAACAAGGTCAATTGGTGTCAGATGAAATTATTATACGTTTATTGTCAAAGAGACTTGTTGCTGGGGAAGCTAAAGGCGATCTGGGATTTATTCTTGATGGTTTTCCTCGAACAATTAAGCAAGCAGAAATATTGGAAGGGGTAACTGACATTGACTTGGTAATCAATCTGAAGCTCCGAGAAGATGTTCTGCTTGAGAAATGCCTTGGTAGGAGAATTTGCAATCAGTGTGGGGGTAATTTTAATGTTGCTTCTATTAACATCAAGGCCGAGAATGGGAGCCCTGAAATTATTATGGCTCCACTTCTTCCTCCTGAGAATTGTATGTCAAAGCTCATTACTCGATCAGATGATACTGAATCAGTGGTCAAAGAAAGGCTTCGAATATACAATGAAATGACTCAGCCTGTGGAGGAATTTTACCGTTCGAGAGGAAAATTATTGGAGTTTAACCTGCCTGGAGGAATCCCGGAATCTTGGCCTAAGTTGCTACATGCTCTTAATCTTGATGATTACGAGGACAAACGATCTGCTGCAGCATAA 858 0.493 MVAVTRLAKRASTFSPQMRRCLSSSEVKSHAPPHDAASFRPFPRREDLSKRCVQWAFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSDPLSSQLSEIVKQGQLVSDEIIIRLLSKRLVAGEAKGDLGFILDGFPRTIKQAEILEGVTDIDLVINLKLREDVLLEKCLGRRICNQCGGNFNVASINIKAENGSPEIIMAPLLPPENCMSKLITRSDDTESVVKERLRIYNEMTQPVEEFYRSRGKLLEFNLPGGIPESWPKLLHALNLDDYEDKRSAAA* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0420 285 PANTHER ADENYLATE KINASE 1 285 - -
Gso10g0420 285 TIGRFAM adk: adenylate kinase 55 272 IPR006259 GO:0004017|GO:0005524|GO:0016776
Gso10g0420 285 Pfam Adenylate kinase 58 250 - -
Gso10g0420 285 CDD ADK 54 256 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso10g0420 285 Hamap Adenylate kinase [adk]. 53 273 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso10g0420 285 ProSitePatterns Adenylate kinase signature. 135 146 IPR033690 -
Gso10g0420 285 Gene3D - 43 274 IPR027417 -
Gso10g0420 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 272 IPR027417 -
Gso10g0420 285 PRINTS Adenylate kinase signature 56 69 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso10g0420 285 PRINTS Adenylate kinase signature 84 98 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso10g0420 285 PRINTS Adenylate kinase signature 135 151 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso10g0420 285 PRINTS Adenylate kinase signature 220 235 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso10g0420 285 PRINTS Adenylate kinase signature 237 251 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso10g0420 285 PANTHER NUCLEOTIDE KINASE 1 285 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0420 Gso-Chr10 4462973 4466716 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0420 K00939 - gmx:100779881 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1475 19 43600596 43603464 Gso10g0420 10 4462973 4466716 PCT
Gso3g1490 3 40819924 40822109 Gso10g0420 10 4462973 4466716 PCT
Gso10g0420 10 4462973 4466716 Gso19g1475 19 43600596 43603464 PCT
Gso10g0420 10 4462973 4466716 Gso3g1490 3 40819924 40822109 PCT