Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1459 ATGAATGTGGTGGGCAAAGTTGGAAGCTTGATAACCCAAGGTGTCTATTCAGTTGCTACCCCTTTTCACCCCTTTGGTGGGGCTGTTGATGTCATTGTTGTTCAGCAGCAAGATGGCACGTTCCGGTGCACGCCGTGGTATGTTCGCTTTGGTAAGTTTCAAGGTGTGCTAAAAGGTGCTGAGAAGATTGTTCGGATAAATGTCAACGGGATTGAGGCAAACTTCCACATGTATCTTGACAATTCAGGGGAGGCGTATTTTGTAAAAGAGGTGGATGATGATTGTGGTGATAAAGGAATAAAGTCAAATGGGTCTCCTGAAGTTGCTGATAACTCTGAATTCAGACGAGAACATGGTGGTGTCGAAATTCATGAAAAAGATAATAGTTATCTGAGTATGAATGATACACCTGGTTATAGACTTGGCCATAGCATATCTGATTCAGGGGTGCCTTATCTTTCAGGTGAAAGCCGTTCCTCAGTTTTGTCACAACTTCAAAGGGAAGAATCTGATGTTGATAGGATATTTTATGAATTCCCAGATGATCAATCCTCTTTTGAAGGTTCACTTGATGTTTCTGAATATGAGTCTAGTCGATATGAGAATCTAGATATAGAGAATTTGGTGGACTCACAGGGTTCCCAGCCGGAGGTGGTCTTGGTCAGTGTTGATGGTCATGTACTGACGGCCCCTATCTCAAAATCTGAGCAGAATGAGGACAATGTGCAGTTAAAAACTCCTCAATTTCATCTAGGCCCAGGTGAAGAGACTGACTTCTATGAAGGCAATGGGGAATTTATTTCTGCTGAAAATGCTTGGGCTGCTGATTATGTTAGTCAGGTGGATGCTTCAACAGCTGATGTTCCAGCTAATAGTTATGACACTAAGGTTGGTGATGATAGTTCTGGGCTCCTTTTGGAAGCTCAAAGAAAGGAGGTAACTATTTGTCACACTGAGGAAGCCTTGGTGATTAAAAATCATGAAGATCATCATTTACAAACTGATTCAGAAGAGGTTGTATCTTGTATGAAGAGACAGAGTGTCTTCAAAAGTTGTTTGGAATTAAATGAGTTTACTCACCACCAGGCTGGAAATGCTGATTCACAAGATGTAGTTTCTTCATTGGAGGTTCAAAATTCAGCAGAGGAATCTAATGCGAATTGTTCAATTACGGATGAAAATGAACAGGAAAACATCAAACAATCTAGAAACATTGATGAGTTATCTCCCGTTAGTGGGCCTACTTCCTTGGATGAACGTAGTTCTCTAGAATTAGAAGTAGAACTTCAAGAGGTTGATAAATATGCACCAGTAGAAGTTGACACTGGTTCTGGCAGTCATTCTGGTACTAAGGATATTATTGAATGTAATGATGAACATGTTGGAAAGTCAGTATCAAATGACCTGGTAGATGATAGTCAACAAACCTCTGCACTTGAAGATTCTTGTAAGAAAAGTGAACTAACTGAACCTCAAACAGCTACTTCCAATGAGGAGGACCAAAGTCATTCTGCTTTGAGGTTTGAGGCCTCACTTTGTGGTCATGAACTTAAAGCGGGTATGGGTTTGGTTGCTGCTGCCGAGGTTTTTGAAGCACACCGGATATCTGCAGAAGAATTTAGAAGTTCTGCATTATCCATAATTAAGAATGAAAATCTTGTTCTGAAGTTCAGAGAGAGGTATCTGCTGTGGGAAAAGGCTGCTCCTCTTGTACTTGGAATGACTGTATTTGGTTTAGACTTACCTGTTGAGCCCAAAGATACAATTCCAGTGGGACAGGATGATGCAGTGAAGGCCAAGAATGATGCTCCTGGACCAGCTTCGTCTGGACGCAGATGGAGACTTTGGCCTATGCCTTTTCGAAGAGTCAAGACAATTGATCACACTGATAGTGTATCAAGTGAGGAGGTATTTGTAGATTCTGAGTCTGATTGGCAAACTTCTGTTGTCGAGCCATCTCCAACATCTGCTAGGCATGAGTCTCCTCGCAAGCAATTTGTGAGGACAAATGTTCCCTCTAATGAGATGATAGCATCCTTAAATCTCAAAGATGGTCAAAATTTGGTAACCTTCAGTTTCTCTTCCAGGGTTCTTGGAACGCAACAGGTTGATGCTCATATATACTTATGGAAGTGGAATGCAAGAATTGTAATTTCAGATGTAGATGGAACTATTACCAAATCTGATGTTTTGGGGCAGTTCATGCCTTTAGTTGGCAAAGATTGGTCACAGTCCGGAGTGGCAAGGCTTTTCTCAGCTATTAAAGAAAATGGATACCAGCTACTGTTCTTGAGCGCTCGTGCTATTGTCCAAGCTTATCTAACCAGGAACTTTTTGCTTAACCTGAAACAGGATGGCAAGACCTTACCGAATGGACCTGTTGTTATTTCACCTGATGGATTATTTCCCTCTCTTTACCGAGAAGTAATAAGAAGGGCACCTCATGAGTTCAAGATTGCTTGTCTAGAGGATATCAGAAGACTTTTCCCTTCCGACTATAATCCGTTCTATGCGGGGTTTGGCAATAGAGACACGGATGAACTCAGTTACAGGAAGATAGGAATCCCGAAGGGCAAGATATTTATTATTAATCCTAAGGGTGAGGTGGCAATAAGTCATCGTATTGATGCAAAATCTTACACATCATTACACACACTCGTCAATGATATGTTCCCTCCTACTTCTTTGGTTGAACAGGAGGACTTCAACTCATGGAATTATTGGAGAATGCCTTTTTCAGACGTTGATTAG 2751 0.4137 MNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRCTPWYVRFGKFQGVLKGAEKIVRINVNGIEANFHMYLDNSGEAYFVKEVDDDCGDKGIKSNGSPEVADNSEFRREHGGVEIHEKDNSYLSMNDTPGYRLGHSISDSGVPYLSGESRSSVLSQLQREESDVDRIFYEFPDDQSSFEGSLDVSEYESSRYENLDIENLVDSQGSQPEVVLVSVDGHVLTAPISKSEQNEDNVQLKTPQFHLGPGEETDFYEGNGEFISAENAWAADYVSQVDASTADVPANSYDTKVGDDSSGLLLEAQRKEVTICHTEEALVIKNHEDHHLQTDSEEVVSCMKRQSVFKSCLELNEFTHHQAGNADSQDVVSSLEVQNSAEESNANCSITDENEQENIKQSRNIDELSPVSGPTSLDERSSLELEVELQEVDKYAPVEVDTGSGSHSGTKDIIECNDEHVGKSVSNDLVDDSQQTSALEDSCKKSELTEPQTATSNEEDQSHSALRFEASLCGHELKAGMGLVAAAEVFEAHRISAEEFRSSALSIIKNENLVLKFRERYLLWEKAAPLVLGMTVFGLDLPVEPKDTIPVGQDDAVKAKNDAPGPASSGRRWRLWPMPFRRVKTIDHTDSVSSEEVFVDSESDWQTSVVEPSPTSARHESPRKQFVRTNVPSNEMIASLNLKDGQNLVTFSFSSRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWSQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRNFLLNLKQDGKTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIRRLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRIDAKSYTSLHTLVNDMFPPTSLVEQEDFNSWNYWRMPFSDVD* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1459 916 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 916 - -
Gso19g1459 916 SUPERFAMILY HAD-like 708 858 IPR036412 -
Gso19g1459 916 MobiDBLite consensus disorder prediction 467 501 - -
Gso19g1459 916 PANTHER LIPIN 1 916 IPR026058 -
Gso19g1459 916 MobiDBLite consensus disorder prediction 403 419 - -
Gso19g1459 916 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 509 616 IPR031703 -
Gso19g1459 916 MobiDBLite consensus disorder prediction 464 503 - -
Gso19g1459 916 Pfam lipin, N-terminal conserved region 1 96 IPR007651 -
Gso19g1459 916 MobiDBLite consensus disorder prediction 393 421 - -
Gso19g1459 916 Pfam LNS2 (Lipin/Ned1/Smp2) 671 892 IPR013209 -
Gso19g1459 916 SMART lns2 716 872 IPR031315 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1459 Gso-Chr19 43472505 43479753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1459 K15728 - gmx:100780784 1808.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1459 19 43472505 43479753 Gso3g1473 3 40706461 40711651 GST
Gso19g1459 19 43472505 43479753 Gso10g0405 10 4290888 4300280 PCT
Gso10g0405 10 4290888 4300280 Gso19g1459 19 43472505 43479753 PCT