Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0405 ATGAATGTGGTAGGCAAAGTTGGAAGCTTGATAACTCAAGGTGTCTACTCAGTTGCTACCCCTTTTCACCCCTTTGGTGGGGCTGTTGATGTGATTGTTGTTCAGCAACAAGATGGGACATTTCGAAGCACGCCTTGGTATGTTCGGTTTGGTAAATTTCAGGGTGTACTCAAAGGTGCCGAGAAGTTTGTTAGGATAAATGTTAATGGTGTTGAGGCCAATTTTCACATGTATCTTGACAATTCGGGGGAGGCTTATTTTTTGAAGGAGGTGGATGATGATAAAGTAGTTGATTCAATTGAGGCTGTTCAAGATTCTATTGACAAAAAGAATGGCTATTTGAGTAATGTTCATAGACTTGATCATAGCATCTCGGATTCTGGGGTGCTTCAGTTGAAAGATGAGAGTGATTCCTTGGTTTTGCCTCAACTTCAAAGGGCAGAATCTGATGTTGATAGGAGGTTTTATGAATTCCCGGATGATCGATCTTCTTTAGAAGATTCAGTTGAGTTGTCGGAATATGAGTCTAATTCGTATGAGAGCCTAGAGGGAGACAATTTTGGGGAGTCACAGGGTTCACATCCAGAGATGGTCTTGGTGAGTGTTGATGGTCATATATTGACTGCCCCTATCTCAGAATCAGAGCAGACTGAGGAGAATGTGCAGTTAAAAACTCCTCAATTTCATCTGGGACCAGGTGAAGAGACTGACTTATGTGAAGGCAACGGAGAGTTTAGTACTGGTGAAAGTGCTTGGGCTGCTGATTATATTAATCAGTTGGGTGCTCAAACAACTAATGTCCAATCTAGACGTTGTGACACTAACGGTGATGATAATACTTCTAAGCTTTTGCTTGAAGTTTGTCAAGGAGAGGAGGCACATATTTGTCTAGCACAGGATACCGTGGAGATTAAAAATCAAGAAGATCATATGAAAACTGATTCAGAAGAGGCTGCATCAGGTATCAAGAGGGAGAATGTTTTCAAAAGTTGTTTGGAGCTACAAGATTTTGGTCAGCAGGCTGGAAATGCTGATTTACAAAATATAGGTTCTTCATTGAAGATTCAAAATTCAGTAGAGGAATCTAATGCAAGTCATCCTGCAGTTGATGAAAATGAACAGGAGAGCATTGCAATATCTAAAAACGGTGATGAGTTATCACCTCCTAGTGGTTCTGCTTCTTCTAATGGCCATAGATCACCGAAATCAGAGTTGGAAACTCAAGAGGTTGAGAAAAATGCATCAGGAGAAGTTGAAACTGCTTCTGGCTCTCATTCTGTCACTACTTATAGTGAACAGAATGATGAACACGTTGACAAGACAGTAACAAATGATGAGTTAGATGATAATCAACAAACCCCTGCACTCAAAGATGTTAGGGCTACAAGTGAGGTGGTGGAGCCTCAAACAGAAACTTCCAATAAAGGGGATCAAAGCCATTTGGGTTTGGGATTTGAGATCTCCCTTTGTGGTCATGAACTTAAGGTGGGCATGGGTTCAGTAGCTGCTGCTGAAGCGTTTGAAGCACATCGCATATCCGTAGTTGACTTCACAAGTTCTGCTCCATCAATAATTAAAAATCAAAATCTTGTTATCAAGTTTAAAGAGAGGTACATGACGTGGGAAAAGGCTGCTCCTCTTGTTCTTGGAATGGCTGTTTATAGTTTAGATTTACCTGTTGAGTCCAAAGATACAATTCCTGTGGAACAGGATCATGCATTGAAGTCCAGGGATGATGATCTGGGATCATCTTCGTCTGGACGCAGATGGAGACTTTGGCCTATTCCTTTTCGAAAGGTCAAAACATTTGAGCATACTAATAGCAACTCATCAAATGAGGAGGTATTTCTAGATTCTGAGTCTGGATCTCTGATAGAACCAACTCCAGCATCCAGTACCCAGGGATCTCCTCATAAGCAATTTCTAAGAACAAATGTTCCCACTACCAAGCAGATAGCATCCTTAAATCTCAAAGAGGGTCAAAATTTGGTAACCTTCAGTTTCTCTACAAGGGTTCTCGGAACACAACAGGTTGATGCTCATATTTATTTATGGAAGTGGAATGCAAGAATTGTAATTTCAGACGTTGATGGAACTATTACAAAGTCTGATGTTTTGGGGCAGTTCATGCCTTTAGTTGGCAAAGATTGGACACAATCTGGAGTGGCAAGGCTTTTCTGTGCTATTAAGGAAAATGGATACCAACTACTTTTTCTGAGTGCCCGTGCAATTGTCCAGGCATATCTAACCAGAAACTTCTTGCTTAACCTGAAACAGGATGGAAAAACCTTACCAAATGGACCTGTTGTTATATCACCTGATGGATTATTTCCCTCGCTTTACCGAGAAGTGATAAGAAGAGCACCTCACGAGTTCAAGATTGCTTGTTTAGAGGATATCAAAAGACTTTTCCCATCTGACTATAATCCATTCTATGCTGGATTTGGCAATAGAGATACAGATGAACTTAGTTACAGAAAGATTGGAATCCCGAAGGGCAAAATATTTATTATCAACCCTAAGGGTGAGGTAGCTATTAGTCAGCGTATCGGCGCAAAGTCGTATACATCATTACATACCCTCGTCAATGACATGTTTCCACCAACTTCTTTGGTCGAGCAGGAGGACTACAACTCATGGAATTATTGGAAAACGCCATTGCCAGATATTGATTAG 2676 0.4084 MNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKFVRINVNGVEANFHMYLDNSGEAYFLKEVDDDKVVDSIEAVQDSIDKKNGYLSNVHRLDHSISDSGVLQLKDESDSLVLPQLQRAESDVDRRFYEFPDDRSSLEDSVELSEYESNSYESLEGDNFGESQGSHPEMVLVSVDGHILTAPISESEQTEENVQLKTPQFHLGPGEETDLCEGNGEFSTGESAWAADYINQLGAQTTNVQSRRCDTNGDDNTSKLLLEVCQGEEAHICLAQDTVEIKNQEDHMKTDSEEAASGIKRENVFKSCLELQDFGQQAGNADLQNIGSSLKIQNSVEESNASHPAVDENEQESIAISKNGDELSPPSGSASSNGHRSPKSELETQEVEKNASGEVETASGSHSVTTYSEQNDEHVDKTVTNDELDDNQQTPALKDVRATSEVVEPQTETSNKGDQSHLGLGFEISLCGHELKVGMGSVAAAEAFEAHRISVVDFTSSAPSIIKNQNLVIKFKERYMTWEKAAPLVLGMAVYSLDLPVESKDTIPVEQDHALKSRDDDLGSSSSGRRWRLWPIPFRKVKTFEHTNSNSSNEEVFLDSESGSLIEPTPASSTQGSPHKQFLRTNVPTTKQIASLNLKEGQNLVTFSFSTRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVARLFCAIKENGYQLLFLSARAIVQAYLTRNFLLNLKQDGKTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISQRIGAKSYTSLHTLVNDMFPPTSLVEQEDYNSWNYWKTPLPDID* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0405 891 PANTHER LIPIN 1 891 IPR026058 -
Gso10g0405 891 MobiDBLite consensus disorder prediction 381 479 - -
Gso10g0405 891 MobiDBLite consensus disorder prediction 465 479 - -
Gso10g0405 891 MobiDBLite consensus disorder prediction 414 431 - -
Gso10g0405 891 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 485 592 IPR031703 -
Gso10g0405 891 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 891 - -
Gso10g0405 891 MobiDBLite consensus disorder prediction 381 401 - -
Gso10g0405 891 SMART lns2 691 847 IPR031315 -
Gso10g0405 891 SUPERFAMILY HAD-like 683 833 IPR036412 -
Gso10g0405 891 Pfam LNS2 (Lipin/Ned1/Smp2) 645 867 IPR013209 -
Gso10g0405 891 Pfam lipin, N-terminal conserved region 1 96 IPR007651 -
Gso10g0405 891 MobiDBLite consensus disorder prediction 432 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0405 Gso-Chr10 4290888 4300280 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0405 K15728 - gmx:100798304 1750.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1459 19 43472505 43479753 Gso10g0405 10 4290888 4300280 PCT
Gso3g1473 3 40706461 40711651 Gso10g0405 10 4290888 4300280 PCT
Gso10g0405 10 4290888 4300280 Gso19g1459 19 43472505 43479753 PCT
Gso10g0405 10 4290888 4300280 Gso3g1473 3 40706461 40711651 PCT